RNA–Protein interactions for RNA: ENST00000601697.5

PSMC4-206, Transcript of proteasome 26S subunit, ATPase 4, human

TSL 2

Gene PSMC4, Length 1,623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC4-206	ENST00000601697	DGKB	Q9Y6T7	804 aa		13.57	□□□□□ -0.24
PSMC4-206	ENST00000601697	GABRR3	A8MPY1	467 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697		J3QRK9	145 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	PSMD11	O00231	422 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	MT-ND2	P03891	347 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	TIMP2	P16035	220 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	ITGA2	P17301	1181 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	EFNA1	P20827	205 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	IMPA1	P29218	277 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	VIPR2	P41587	438 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	BDKRB1	P46663	353 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	ST8SIA6	P61647	398 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	RAE1	P78406	368 aa	Known RBP	13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	ZNF763	Q0D2J5	394 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	FCHO2	Q0JRZ9	810 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	CAMK2G	Q13555	558 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	E2F2	Q14209	437 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	CLCA4	Q14CN2	919 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	DUSP6	Q16828	381 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	HKDC1	Q2TB90	917 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	ZNF805	Q5CZA5	627 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	ARSI	Q5FYB1	569 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	IGFN1	Q86VF2	1251 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	P3H2	Q8IVL5	708 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	TDH	Q8IZJ6	230 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	OR7G3	Q8NG95	312 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	PKP4	Q99569	1192 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	DPH2	Q9BQC3	489 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	SFXN1	Q9H9B4	322 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	FAM8A1	Q9UBU6	413 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	SLC27A6	Q9Y2P4	619 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	SH3GLB1	Q9Y371	365 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	NOTCH4	Q99466	2003 aa		13.56	□□□□□ -0.24
PSMC4-206	ENST00000601697	FADS2P1	A8MWK0	482 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	FOXE1	O00358	373 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	DIRAS1	O95057	198 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	PAPLN	O95428	1278 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	NFATC1	O95644	943 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	IFNA14	P01570	189 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	TFPT	P0C1Z6	253 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	ELFN1	P0C7U0	828 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	IDS	P22304	550 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	OPRL1	P41146	370 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	RPP38	P78345	283 aa	Known RBP	13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	KCNJ10	P78508	379 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	TEK	Q02763	1124 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	FADD	Q13158	208 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	ITGAD	Q13349	1161 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	ATP1A4	Q13733	1029 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	LAPTM4A	Q15012	233 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	GCNT6	Q5T4J0	391 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	TECPR1	Q7Z6L1	1165 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	C12orf40	Q86WS4	652 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	SLC30A8	Q8IWU4	369 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	OXR1	Q8N573	874 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	RASGEF1A	Q8N9B8	481 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	HUS1B	Q8NHY5	278 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	MYDGF	Q969H8	173 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	AP2M1	Q96CW1	435 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	HRASLS5	Q96KN8	279 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	C7orf34	Q96L11	122 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	REEP4	Q9H6H4	257 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	ACOT13	Q9NPJ3	140 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	SH3BP4	Q9P0V3	963 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	ENOPH1	Q9UHY7	261 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	TDRKH	Q9Y2W6	561 aa	Known RBP	13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	TRANK1	O15050	2925 aa		13.55	□□□□□ -0.24
PSMC4-206	ENST00000601697	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	CLDN24	A6NM45	220 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697		A8MVJ9	347 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697		H3BM21	787 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	TNFRSF11B	O00300	401 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	FADS2	O95864	444 aa	Known RBP	13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	SLC16A8	O95907	504 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	CTSL	P07711	333 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	ANXA8	P13928	327 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	ACVR2A	P27037	513 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	RRM2	P31350	389 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	KRT20	P35900	424 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	MAP2K4	P45985	399 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	PREP	P48147	710 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	CD97	P48960	835 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	PXN	P49023	591 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	RPS13	P62277	151 aa	Known RBP	13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	SELENOW	P63302	87 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	ELP6	Q0PNE2	266 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	TMEM115	Q12893	351 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	TRIM16L	Q309B1	348 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	IFI44L	Q53G44	452 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	FAM78A	Q5JUQ0	283 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	TRIM40	Q6P9F5	258 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	CHRDL2	Q6WN34	429 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	SLCO4C1	Q6ZQN7	724 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	GALNT10	Q86SR1	603 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	TMPRSS11B	Q86T26	416 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	DEPDC4	Q8N2C3	294 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	OR52N2	Q8NGI0	321 aa		13.54	□□□□□ -0.24
PSMC4-206	ENST00000601697	SPPL2A	Q8TCT8	520 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms