RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 CYP2A13Q16696 494 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 SPATS1Q496A3 300 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 C9orf64Q5T6V5 341 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 WASH2PQ6VEQ5 465 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 SLCO4C1Q6ZQN7 724 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 OLIG3Q7RTU3 272 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 AMZ2Q86W34 360 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 ZZZ3Q8IYH5 903 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 SIX5Q8N196 739 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 CENPSQ8N2Z9 138 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 ZNF557Q8N988 423 aaPredicted RBP11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 ZNF540Q8NDQ6 660 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 SLC5A11Q8WWX8 675 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 RAB8BQ92930 207 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 COG8Q96MW5 612 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 ABCG4Q9H172 646 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 POLE4Q9NR33 117 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 CTPS2Q9NRF8 586 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 THUMPD1Q9NXG2 353 aaKnown RBP11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 MYO15AQ9UKN7 3530 aa11.08□□□□□ -0.64
ARHGEF1-220ENST00000600274 M0QX08 132 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 QSOX1O00391 747 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 SLC16A5O15375 505 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 SLC31A1O15431 190 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 VIPP01282 170 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 IMPDH2P12268 514 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 LBX1P52954 281 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 SPIBQ01892 262 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 ELAVL3Q14576 367 aaKnown RBP11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 PRAMEF14Q5SWL7 426 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 PRAMEF13Q5VWM6 474 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 ZNF547Q8IVP9 402 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 TTC29Q8NA56 475 aaPredicted RBP11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 CHDHQ8NE62 594 aaPredicted RBP11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 HPS1Q92902 700 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 GTPBP3Q969Y2 492 aaKnown RBP11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 TESCQ96BS2 214 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 ABHD8Q96I13 439 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 CCDC115Q96NT0 180 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 TRBV5-3A0A0A0MS03 114 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 PRAMEF33A0A0G2JMD5 474 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 A8MU76 341 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 FAM20BO75063 409 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 CISD3P0C7P0 127 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 PTPN6P29350 595 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 HLCSP50747 726 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 RAE1P78406 368 aaKnown RBP11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 CD300CQ08708 224 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 ELP6Q0PNE2 266 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 CSTF3Q12996 717 aaKnown RBP11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 DNASE1L3Q13609 305 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 TP53BP2Q13625 1128 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 GGTA1PQ4G0N0 100 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 PRSS36Q5K4E3 855 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 TMIGD1Q6UXZ0 262 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 AHSA2Q719I0 299 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 ERN2Q76MJ5 926 aaKnown RBP11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 HIPK1Q86Z02 1210 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 PIK3C3Q8NEB9 887 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 PPP1R16AQ96I34 528 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 MIR1-1HGQ9H1L0 117 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 ERVK-18Q9QC07 812 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 RPS6KA6Q9UK32 745 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.07□□□□□ -0.643e-7■■■■■ 42.5
ARHGEF1-220ENST00000600274 PCDHB11Q9Y5F2 797 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 PCDHGA4Q9Y5G9 962 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 GRXCR2A6NFK2 248 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 J3KTA2 159 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 PPM1DO15297 605 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 TPST2O60704 377 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 NME6O75414 186 aaPredicted RBP11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 FGF19O95750 216 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 RETP07949 1114 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 C1GALT1C1LP0DN25 315 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 P2RY2P41231 377 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 MRPL19P49406 292 aaKnown RBP11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 PNLIPRP1P54315 467 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 PPP2R2BQ00005 443 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 RGS21Q2M5E4 152 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 PAGE2BQ5JRK9 111 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 LRIF1Q5T3J3 769 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 CPZQ66K79 652 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 ZNF773Q6PK81 442 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 PTOV1Q86YD1 416 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 VANGL1Q8TAA9 524 aaPredicted RBP11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 FERD3LQ96RJ6 166 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 NODALQ96S42 347 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 YIPF4Q9BSR8 244 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 SACM1LQ9NTJ5 587 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 ADPRHL2Q9NX46 363 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 FBXO10Q9UK96 956 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 PLEKHM1Q9Y4G2 1056 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 DOCK9Q9BZ29 2069 aa11.07□□□□□ -0.64
ARHGEF1-220ENST00000600274 EDDM13A0A1B0GTR0 161 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 OR52A4PA6NMU1 304 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 EIF3FO00303 357 aaPredicted RBP11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 OR1F1O43749 312 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 IDSP22304 550 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 PBX2P40425 430 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 SLC19A1P41440 591 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms