RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 CSF2RBP32927 897 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 GRIA3P42263 894 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 ARL4DP49703 201 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 GFERP55789 205 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 RPS15AP62244 130 aaKnown RBP11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 CSNK1G2P78368 415 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 CCL7P80098 99 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 MEF2AQ02078 507 aaPredicted RBP11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 RBBP5Q15291 538 aaKnown RBP11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 CLPPQ16740 277 aaPredicted RBP11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 SGO1Q5FBB7 561 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 FRG2Q64ET8 278 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 TMIGD1Q6UXZ0 262 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 DTX1Q86Y01 620 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 DDIASQ8IXT1 998 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 CARFQ8N187 725 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 C19orf47Q8N9M1 422 aaKnown RBP11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 TTLQ8NG68 377 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 WDR48Q8TAF3 677 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 TWIST2Q8WVJ9 160 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 FRG2BQ96QU4 278 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 GFM1Q96RP9 751 aaKnown RBP11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 PLCD4Q9BRC7 762 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 TNFRSF12AQ9NP84 129 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 C1GALT1Q9NS00 363 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 SOHLH2Q9NX45 425 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 KLHL3Q9UH77 587 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 ZNF225Q9UK10 706 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 TIMM22Q9Y584 194 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 USH1CQ9Y6N9 552 aa11.52□□□□□ -0.57
SHKBP1-213ENST00000597325 IGKV1-8A0A0C4DH67 115 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 MANBAO00462 879 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 HAT1O14929 419 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 NVLO15381 856 aaKnown RBP11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 OR1F1O43749 312 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 PRAMEF4O60810 478 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 ULK1O75385 1050 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 CLDN1O95832 211 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 C9P02748 559 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 PVRP15151 417 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 CD22P20273 847 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 DRD4P21917 467 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 GSTM2P28161 218 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 FOXA1P55317 472 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 YBX1P67809 324 aaKnown RBP11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 CBX1P83916 185 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 ZNF33BQ06732 778 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 SQSTM1Q13501 440 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 DDX39BQ13838 428 aaKnown RBP11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 SPIDRQ14159 915 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 E2F2Q14209 437 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 IMPG1Q17R60 797 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 SNAP47Q5SQN1 464 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 CACHD1Q5VU97 1274 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 PRAMEF9Q5VWM5 478 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 ZNF425Q6IV72 752 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 FIGLAQ6QHK4 219 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 MAMDC2Q7Z304 686 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 SPATA21Q7Z572 469 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 PRSS42Q7Z5A4 293 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 PAQR7Q86WK9 346 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 FAM129CQ86XR2 697 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 OR4K1Q8NGD4 311 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 SELENOMQ8WWX9 145 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 ZUFSPQ96AP4 578 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 C19orf60Q96EN9 201 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 THOC1Q96FV9 657 aaKnown RBP11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 MAP3K3Q99759 626 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 CCT7Q99832 543 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 NUDT22Q9BRQ3 303 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 KLHL25Q9H0H3 589 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 RABEP2Q9H5N1 569 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 NT5DC2Q9H857 520 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 RIC8BQ9NVN3 520 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 ADGRE2Q9UHX3 823 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 ZNF490Q9ULM2 529 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 BTRCQ9Y297 605 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 KLHL20Q9Y2M5 609 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 KLK4Q9Y5K2 254 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 DNAJC15Q9Y5T4 150 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 HIVEP3Q5T1R4 2406 aa11.51□□□□□ -0.57
SHKBP1-213ENST00000597325 NAV3Q8IVL0 2385 aa11.5□□□□□ -0.57
SHKBP1-213ENST00000597325 A0A0G2JND7 137 aa11.5□□□□□ -0.57
SHKBP1-213ENST00000597325 FEZF1A0PJY2 475 aa11.5□□□□□ -0.57
SHKBP1-213ENST00000597325 OR2A25A4D2G3 310 aa11.5□□□□□ -0.57
SHKBP1-213ENST00000597325 ANKDD1BA6NHY2 528 aa11.5□□□□□ -0.57
SHKBP1-213ENST00000597325 SLC9B1P1A6NJY1 282 aa11.5□□□□□ -0.57
SHKBP1-213ENST00000597325 PIP5K1BO14986 540 aa11.5□□□□□ -0.57
SHKBP1-213ENST00000597325 DIAPH2O60879 1101 aa11.5□□□□□ -0.57
SHKBP1-213ENST00000597325 ZBTB11O95625 1053 aaPredicted RBP11.5□□□□□ -0.57
SHKBP1-213ENST00000597325 ST6GAL1P15907 406 aa11.5□□□□□ -0.57
SHKBP1-213ENST00000597325 SERPINB3P29508 390 aa11.5□□□□□ -0.57
SHKBP1-213ENST00000597325 AQP5P55064 265 aa11.5□□□□□ -0.57
SHKBP1-213ENST00000597325 BTKQ06187 659 aa11.5□□□□□ -0.57
SHKBP1-213ENST00000597325 TCHHL1Q5QJ38 904 aaPredicted RBP11.5□□□□□ -0.57
SHKBP1-213ENST00000597325 TMEM71Q6P5X7 295 aa11.5□□□□□ -0.57
SHKBP1-213ENST00000597325 RNF165Q6ZSG1 346 aa11.5□□□□□ -0.57
SHKBP1-213ENST00000597325 ACAD11Q709F0 780 aa11.5□□□□□ -0.57
SHKBP1-213ENST00000597325 LAS2Q8IYD9 372 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms