RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 NEURL1O76050 574 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 TSPAN12O95859 305 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 B3GALT4O96024 378 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 CCDC175P0C221 793 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 ALOX12P18054 663 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 TPP2P29144 1249 aaPredicted RBP9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 CYB561P49447 251 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 CCR8P51685 355 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 SKP1P63208 163 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 RGS1Q08116 209 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 SP140Q13342 867 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 DEFB134Q4QY38 66 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 ZNF468Q5VIY5 522 aaPredicted RBP9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 NIPAL1Q6NVV3 410 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 TTC27Q6P3X3 843 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 C3P1Q6ZMU1 363 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 DOLPP1Q86YN1 238 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 LGI4Q8N135 537 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 KIF2BQ8N4N8 673 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 CPSF7Q8N684 471 aaKnown RBP9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 ZNF740Q8NDX6 193 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 TRIM58Q8NG06 486 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 ELP5Q8TE02 316 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 CHTF18Q8WVB6 975 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 TMEM125Q96AQ2 219 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 PYCR2Q96C36 320 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 SDCCAG3Q96C92 435 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 LINGO1Q96FE5 620 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 SNF8Q96H20 258 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 SIGLEC10Q96LC7 697 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 SGPP1Q9BX95 441 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 TRIM54Q9BYV2 358 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 ARL15Q9NXU5 204 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 COQ3Q9NZJ6 369 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 ARHGAP21Q5T5U3 1957 aa9.91□□□□□ -0.82
CHMP2A-202ENST00000596708 URADA6NGE7 173 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 E9PLN8 166 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 CDK2AP1O14519 115 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 NME2P1O60361 137 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 PRMT3O60678 531 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 ZNF888P0CJ79 500 aaPredicted RBP9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 ZNF24P17028 368 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 NME2P22392 152 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 HNF4AP41235 474 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 MLF1P58340 268 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 BTG2P78543 158 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 TIAL1Q01085 375 aaKnown RBP eCLIP9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 DHX9Q08211 1270 aaKnown RBP9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 PDAP1Q13442 181 aaKnown RBP9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 PWP1Q13610 501 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 CSHL1Q14406 222 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 PHKG1Q16816 387 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 CATSPEREQ5SY80 951 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 RBM20Q5T481 1227 aaKnown RBP9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 DUPD1Q68J44 220 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 CCDC137Q6PK04 289 aaKnown RBP9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 ZNF662Q6ZS27 426 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 ABHD13Q7L211 337 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 SIAH3Q8IW03 269 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 AGGF1Q8N302 714 aaeCLIP9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 AFAP1L2Q8N4X5 818 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 C2CD4AQ8NCU7 369 aaPredicted RBP9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 ABHD11Q8NFV4 315 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 CA5BP1Q8WTZ4 195 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 PHF10Q8WUB8 498 aaKnown RBP9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 VKORC1Q9BQB6 163 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 TRIM51Q9BSJ1 452 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 DEFB126Q9BYW3 111 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 RHBGQ9H310 441 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 PPT2Q9UMR5 302 aa9.9□□□□□ -0.82
CHMP2A-202ENST00000596708 CCDC168Q8NDH2 2452 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 A0A1B0GTH9 108 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 TRBC2A0A5B9 178 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 SAGE2PA6NJ88 616 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 KLRC4-KLRK1H3BQV0 150 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 PSMD12O00232 456 aaPredicted RBP9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 FCHO1O14526 889 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 TFECO14948 347 aaPredicted RBP9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 CDC40O60508 579 aaKnown RBP eCLIP9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 GUCA1CO95843 209 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 TPOP07202 933 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 CAPN3P20807 821 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 MAGEA3P43357 314 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 MEOX1P50221 254 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 ITGA8P53708 1063 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 KRTAP10-9P60411 292 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 IL2P60568 153 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 RAB8AP61006 207 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 TLE4Q04727 773 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 HYAL2Q12891 473 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 RBBP5Q15291 538 aaKnown RBP9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 RNFT1Q5M7Z0 435 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 MEX3BQ6ZN04 569 aaKnown RBP9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 QSOX2Q6ZRP7 698 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 PPIL6Q8IXY8 311 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 NAT8LQ8N9F0 302 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 ARMC2Q8NEN0 867 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 OR4K1Q8NGD4 311 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 OR56A3Q8NH54 315 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 UTP15Q8TED0 518 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms