RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 ETV6P41212 452 aa16.73■□□□□ 0.27
ARHGEF1-213ENST00000595897 DGKEP52429 567 aa16.73■□□□□ 0.27
ARHGEF1-213ENST00000595897 DAB2P98082 770 aa16.73■□□□□ 0.27
ARHGEF1-213ENST00000595897 B4GALNT1Q00973 533 aa16.73■□□□□ 0.27
ARHGEF1-213ENST00000595897 MFSD14CQ5VZR4 134 aa16.73■□□□□ 0.27
ARHGEF1-213ENST00000595897 UBQLNLQ8IYU4 475 aa16.73■□□□□ 0.27
ARHGEF1-213ENST00000595897 APCDD1Q8J025 514 aa16.73■□□□□ 0.27
ARHGEF1-213ENST00000595897 C1orf52Q8N6N3 182 aaKnown RBP16.73■□□□□ 0.27
ARHGEF1-213ENST00000595897 FLCNQ8NFG4 579 aa16.73■□□□□ 0.27
ARHGEF1-213ENST00000595897 C2orf49Q9BVC5 232 aaPredicted RBP16.73■□□□□ 0.27
ARHGEF1-213ENST00000595897 H3BQ06 376 aaPredicted RBP16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 J3KTA2 159 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 TFECO14948 347 aaPredicted RBP16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 GABRB1P18505 474 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 PXNP49023 591 aaPredicted RBP16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 SLC11A1P49279 550 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 SMAD3P84022 425 aaKnown RBP16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 PTGES3Q15185 160 aaKnown RBP16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 CDKN3Q16667 212 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 RGMBQ6NW40 437 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 ASCC1Q8N9N2 400 aaKnown RBP16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 FBXO22Q8NEZ5 403 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 NEDD4LQ96PU5 975 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 TRNT1Q96Q11 434 aaKnown RBP16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 MARCH5Q9NX47 278 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 TBC1D24Q9ULP9 559 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 VWA8A3KMH1 1905 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 TMEM229AB2RXF0 380 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 GCM2O75603 506 aaPredicted RBP16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 CKBP12277 381 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 PTX3P26022 381 aaPredicted RBP16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 GANABQ14697 944 aaKnown RBP16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 TRIM60Q495X7 471 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 ANXA8L1Q5VT79 327 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 RAB43Q86YS6 212 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 DCAF4L2Q8NA75 395 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 C2orf15Q8WU43 125 aaKnown RBP16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 MED8Q96G25 268 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 FAM129BQ96TA1 746 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 CHST8Q9H2A9 424 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 SMURF1Q9HCE7 757 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 WDR70Q9NW82 654 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 TBC1D14Q9P2M4 693 aa16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 MBD1Q9UIS9 605 aaPredicted RBP16.72■□□□□ 0.27
ARHGEF1-213ENST00000595897 C1orf226A1L170 272 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 GUCY1B2O75343 617 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 ITGA2P17301 1181 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 CD22P20273 847 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 CD72P21854 359 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 OR1D2P34982 312 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 TUFMP49411 452 aaKnown RBP16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 IRF3Q14653 427 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 TRIM71Q2Q1W2 868 aaKnown RBP16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 CRTC1Q6UUV9 634 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 RFLNAQ6ZTI6 216 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 CBARPQ8N350 705 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 OR2A14Q96R47 310 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 SNX18Q96RF0 628 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 ASPNQ9BXN1 380 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 CLN6Q9NWW5 311 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 BTNL2Q9UIR0 455 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 PLXNA4Q9HCM2 1894 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 H3BM21 787 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 PCDH17O14917 1159 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 MTX2O75431 263 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 CCNB2O95067 398 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 SERPINA4P29622 427 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 ASMTP46597 345 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 LIMK1P53667 647 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 PFN3P60673 137 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 PLD1Q13393 1074 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 COX20Q5RI15 118 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 ZNF648Q5T619 568 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 LIPJQ5W064 366 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 TMEM173Q86WV6 379 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 KRT73Q86Y46 540 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 HS6ST3Q8IZP7 471 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 HJURPQ8NCD3 748 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 OR4K1Q8NGD4 311 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 TP53INP1Q96A56 240 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 FCRL1Q96LA6 429 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 MAGEB10Q96LZ2 347 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 VPS35Q96QK1 796 aa16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 ZNF282Q9UDV7 671 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF1-213ENST00000595897 E7EQ34 232 aa16.71■□□□□ 0.26
ARHGEF1-213ENST00000595897 ADAMTS4O75173 837 aa16.71■□□□□ 0.26
ARHGEF1-213ENST00000595897 GPX5O75715 221 aa16.71■□□□□ 0.26
ARHGEF1-213ENST00000595897 DOC2AQ14183 400 aa16.71■□□□□ 0.26
ARHGEF1-213ENST00000595897 MBTPS1Q14703 1052 aa16.71■□□□□ 0.26
ARHGEF1-213ENST00000595897 FAM26DQ5JW98 314 aa16.71■□□□□ 0.26
ARHGEF1-213ENST00000595897 TMPRSS11AQ6ZMR5 421 aa16.71■□□□□ 0.26
ARHGEF1-213ENST00000595897 OR4C15Q8NGM1 316 aa16.71■□□□□ 0.26
ARHGEF1-213ENST00000595897 VANGL1Q8TAA9 524 aaPredicted RBP16.71■□□□□ 0.26
ARHGEF1-213ENST00000595897 PHOX2BQ99453 314 aa16.71■□□□□ 0.26
ARHGEF1-213ENST00000595897 CDCA4Q9BXL8 241 aa16.71■□□□□ 0.26
ARHGEF1-213ENST00000595897 SGK2Q9HBY8 427 aa16.71■□□□□ 0.26
ARHGEF1-213ENST00000595897 OR51B4Q9Y5P0 310 aa16.71■□□□□ 0.26
ARHGEF1-213ENST00000595897 HOXC11O43248 304 aaPredicted RBP16.7■□□□□ 0.26
ARHGEF1-213ENST00000595897 NDUFB5O43674 189 aa16.7■□□□□ 0.26
ARHGEF1-213ENST00000595897 HNF4AP41235 474 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms