RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 SSPNQ14714 243 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 PLCL1Q15111 1095 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 PTCHD3Q3KNS1 767 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 UNC50Q53HI1 259 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 DUS1LQ6P1R4 473 aaKnown RBP12.27□□□□□ -0.45
SCAF1-202ENST00000595242 KLHL35Q6PF15 583 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 SERPINA9Q86WD7 417 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 AFAP1L2Q8N4X5 818 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 CPSF7Q8N684 471 aaKnown RBP12.27□□□□□ -0.45
SCAF1-202ENST00000595242 CCNYL1Q8N7R7 359 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 DNAJB14Q8TBM8 379 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 MAGEC3Q8TD91 643 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 CADM1Q9BY67 442 aaKnown RBP12.27□□□□□ -0.45
SCAF1-202ENST00000595242 FAM83DQ9H4H8 585 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 IL26Q9NPH9 171 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 OLAHQ9NV23 265 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 MRGBPQ9NV56 204 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 TAS2R1Q9NYW7 299 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 TRMT6Q9UJA5 497 aaKnown RBP12.27□□□□□ -0.45
SCAF1-202ENST00000595242 DHRS7Q9Y394 339 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 PRRC2AP48634 2157 aaKnown RBP12.26□□□□□ -0.45
SCAF1-202ENST00000595242 IGLV3-16A0A075B6K0 115 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 GPR89AB7ZAQ6 455 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 C9J4A7 227 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 CHUKO15111 745 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 KMOO15229 486 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 GSC2O15499 205 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 OR1I1O60431 355 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 KLF7O75840 302 aaPredicted RBP12.26□□□□□ -0.45
SCAF1-202ENST00000595242 SLC25A14O95258 325 aaPredicted RBP12.26□□□□□ -0.45
SCAF1-202ENST00000595242 ATP6V1G2O95670 118 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 IGHEP01854 428 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 RPS17P08708 135 aaKnown RBP12.26□□□□□ -0.45
SCAF1-202ENST00000595242 GPR89BP0CG08 455 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 IDSP22304 550 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 SPINT3P49223 89 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 KCNK10P57789 538 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 ZNF169Q14929 603 aaPredicted RBP12.26□□□□□ -0.45
SCAF1-202ENST00000595242 B3GNTL1Q67FW5 361 aaPredicted RBP12.26□□□□□ -0.45
SCAF1-202ENST00000595242 FCRL6Q6DN72 434 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 FAM180AQ6UWF9 173 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 WASH2PQ6VEQ5 465 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 RINLQ6ZS11 566 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 ACAD11Q709F0 780 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 TAS2R42Q7RTR8 314 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 TEX9Q8N6V9 391 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 ACTRT2Q8TDY3 377 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 OR52B2Q96RD2 323 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 CD180Q99467 661 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 SLC30A3Q99726 388 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 MEAF6Q9HAF1 191 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 FANCEQ9HB96 536 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 TRIM39Q9HCM9 518 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 ATP13A2Q9NQ11 1180 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 SMOXQ9NWM0 555 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 P4HTMQ9NXG6 502 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 KLHL42Q9P2K6 505 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 GALPQ9UBC7 116 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 GNPTGQ9UJJ9 305 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 CDYLQ9Y232 598 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 WDR37Q9Y2I8 494 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 GTF3C1Q12789 2109 aa12.26□□□□□ -0.45
SCAF1-202ENST00000595242 TRGV8A0A0C4DH27 118 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 CCL21O00585 134 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 SDHDO14521 159 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 ENO1P06733 434 aaKnown RBP12.25□□□□□ -0.45
SCAF1-202ENST00000595242 FGF4P08620 206 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 CD99P14209 185 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 MNAT1P51948 309 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 DCDC1P59894 354 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 IL2P60568 153 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 NAA25Q14CX7 972 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 HERC3Q15034 1050 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 SNCBQ16143 134 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 LSM12Q3MHD2 195 aaKnown RBP12.25□□□□□ -0.45
SCAF1-202ENST00000595242 DNAL1Q4LDG9 190 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 WASHC2DQ5SRD0 308 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 FAM151BQ6UXP7 276 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 ADGRG6Q86SQ4 1221 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 LRRTM4Q86VH4 590 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 SPNS2Q8IVW8 549 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 PTGR2Q8N8N7 351 aaPredicted RBP12.25□□□□□ -0.45
SCAF1-202ENST00000595242 GPR26Q8NDV2 337 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 FAM13CQ8NE31 585 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 ULK4Q96C45 1275 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 C14orf79Q96F83 325 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 GBP5Q96PP8 586 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 DPH2Q9BQC3 489 aaPredicted RBP12.25□□□□□ -0.45
SCAF1-202ENST00000595242 TIMM29Q9BSF4 260 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 SLC7A5P2Q9GIP4 190 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 ASB8Q9H765 288 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.25□□□□□ -0.45
SCAF1-202ENST00000595242 HRASLS2Q9NWW9 162 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 SOHLH2Q9NX45 425 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 IKZF3Q9UKT9 509 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 BTRCQ9Y297 605 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 RTTNQ86VV8 2226 aa12.25□□□□□ -0.45
SCAF1-202ENST00000595242 OR5K3A6NET4 321 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 E5RI56 91 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 C19orf84I3L1E1 186 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms