RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SMAD3P84022 425 aaKnown RBP12.74□□□□□ -0.37
VRK3-209ENST00000594948 SPIBQ01892 262 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 HSPA14Q0VDF9 509 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 GAB1Q13480 694 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 E2F2Q14209 437 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 EXOC3L2Q2M3D2 409 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 GCNT6Q5T4J0 391 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 RSBN1Q5VWQ0 802 aaPredicted RBP12.74□□□□□ -0.37
VRK3-209ENST00000594948 TAS1R1Q7RTX1 841 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 ATCAYQ86WG3 371 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 IFNL1Q8IU54 200 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 SLC44A2Q8IWA5 706 aaPredicted RBP12.74□□□□□ -0.37
VRK3-209ENST00000594948 SLC30A8Q8IWU4 369 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 UBQLNLQ8IYU4 475 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 APCDD1Q8J025 514 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 SLC7A5P1Q8MH63 180 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 NAGSQ8N159 534 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 OR2AP1Q8NGE2 309 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 OR52N2Q8NGI0 321 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 WFDC5Q8TCV5 224 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 GEMIN6Q8WXD5 167 aaKnown RBP12.74□□□□□ -0.37
VRK3-209ENST00000594948 CLP1Q92989 425 aaKnown RBP12.74□□□□□ -0.37
VRK3-209ENST00000594948 ASIC4Q96FT7 647 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 TRNT1Q96Q11 434 aaKnown RBP12.74□□□□□ -0.37
VRK3-209ENST00000594948 SDHCQ99643 169 aaPredicted RBP12.74□□□□□ -0.37
VRK3-209ENST00000594948 SLC30A2Q9BRI3 323 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 CCM2Q9BSQ5 444 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 TAPBPLQ9BX59 468 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 TPK1Q9H3S4 243 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 ZNF221Q9UK13 617 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 HCN4Q9Y3Q4 1203 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 PCDHGB2Q9Y5G2 931 aa12.74□□□□□ -0.37
VRK3-209ENST00000594948 A0A1W2PQ67 120 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 C2orf78A6NCI8 922 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 ZAR1LA6NP61 321 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 GREM1O60565 184 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 AP2A2O94973 939 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 SLITRK5O94991 958 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 ENDOUP21128 410 aaKnown RBP12.73□□□□□ -0.37
VRK3-209ENST00000594948 CBLP22681 906 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 RPL3P39023 403 aaKnown RBP12.73□□□□□ -0.37
VRK3-209ENST00000594948 SLC15A1P46059 708 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 XCR1P46094 333 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 MVDP53602 400 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 RHAGQ02094 409 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 DOC2AQ14183 400 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 XKR6Q5GH73 641 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 CRB2Q5IJ48 1285 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 LRRC66Q68CR7 880 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.73□□□□□ -0.37
VRK3-209ENST00000594948 FAM92BQ6ZTR7 304 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 THOC6Q86W42 341 aaKnown RBP12.73□□□□□ -0.37
VRK3-209ENST00000594948 VRK3Q8IV63 474 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 CYP4Z2PQ8N1L4 340 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 B3GNT7Q8NFL0 401 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 Q96MT0 163 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 WDFY2Q96P53 400 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 MGLLQ99685 303 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 NIPSNAP1Q9BPW8 284 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 EMILIN2Q9BXX0 1053 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 DYRK4Q9NR20 520 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 MS4A12Q9NXJ0 267 aa12.73□□□□□ -0.37
VRK3-209ENST00000594948 WBP11Q9Y2W2 641 aaKnown RBP12.73□□□□□ -0.37
VRK3-209ENST00000594948 RBMX2Q9Y388 322 aaKnown RBP12.73□□□□□ -0.37
VRK3-209ENST00000594948 CFAP20Q9Y6A4 193 aaKnown RBP12.73□□□□□ -0.37
VRK3-209ENST00000594948 SLC35F4A4IF30 521 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 CENPBD1B2RD01 187 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 ZNF821O75541 412 aaPredicted RBP12.72□□□□□ -0.37
VRK3-209ENST00000594948 ANXA4P09525 319 aaPredicted RBP12.72□□□□□ -0.37
VRK3-209ENST00000594948 TIA1P31483 386 aaKnown RBP eCLIP12.72□□□□□ -0.37
VRK3-209ENST00000594948 OR1D2P34982 312 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 HTR3AP46098 478 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 NUDT6P53370 316 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 CDH12P55289 794 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 OR2B6P58173 313 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 SNRPD1P62314 119 aaKnown RBP12.72□□□□□ -0.37
VRK3-209ENST00000594948 PTSQ03393 145 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 PLD1Q13393 1074 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 STARD3Q14849 445 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 ZNF630Q2M218 657 aaPredicted RBP12.72□□□□□ -0.37
VRK3-209ENST00000594948 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.72□□□□□ -0.37
VRK3-209ENST00000594948 MPP7Q5T2T1 576 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 RNLSQ5VYX0 342 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 TRIM69Q86WT6 500 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 NPAS4Q8IUM7 802 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 C1orf52Q8N6N3 182 aaKnown RBP12.72□□□□□ -0.37
VRK3-209ENST00000594948 OR4A15Q8NGL6 344 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 OR6F1Q8NGZ6 308 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 SKA2Q8WVK7 121 aaPredicted RBP12.72□□□□□ -0.37
VRK3-209ENST00000594948 CAPSLQ8WWF8 208 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 CEP19Q96LK0 163 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 PIP5K1AQ99755 562 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 FAM83CQ9BQN1 747 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 ABCG8Q9H221 673 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 TP63Q9H3D4 680 aaPredicted RBP12.72□□□□□ -0.37
VRK3-209ENST00000594948 SMURF1Q9HCE7 757 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 AMBNQ9NP70 447 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 FZD3Q9NPG1 666 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 ASAH2Q9NR71 780 aa12.72□□□□□ -0.37
VRK3-209ENST00000594948 RLIMQ9NVW2 624 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms