RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 CHST10O43529 356 aa22.46■■□□□ 1.19
LSM4-202ENST00000593564 NRDCO43847 1150 aa22.46■■□□□ 1.19
LSM4-202ENST00000593564 NEURL1O76050 574 aa22.46■■□□□ 1.19
LSM4-202ENST00000593564 ST13P50502 369 aaKnown RBP22.46■■□□□ 1.19
LSM4-202ENST00000593564 OC90Q02509 493 aaPredicted RBP22.46■■□□□ 1.19
LSM4-202ENST00000593564 RGS1Q08116 209 aa22.46■■□□□ 1.19
LSM4-202ENST00000593564 PDAP1Q13442 181 aaKnown RBP22.46■■□□□ 1.19
LSM4-202ENST00000593564 PPP1R7Q15435 360 aa22.46■■□□□ 1.19
LSM4-202ENST00000593564 DEFB134Q4QY38 66 aa22.46■■□□□ 1.19
LSM4-202ENST00000593564 GDF7Q7Z4P5 450 aa22.46■■□□□ 1.19
LSM4-202ENST00000593564 NT5CQ8TCD5 201 aa22.46■■□□□ 1.19
LSM4-202ENST00000593564 ELP5Q8TE02 316 aa22.46■■□□□ 1.19
LSM4-202ENST00000593564 ATL1Q8WXF7 558 aa22.46■■□□□ 1.19
LSM4-202ENST00000593564 TRIM54Q9BYV2 358 aa22.46■■□□□ 1.19
LSM4-202ENST00000593564 TEP1Q99973 2627 aaKnown RBP22.46■■□□□ 1.19
LSM4-202ENST00000593564 DNALI1O14645 258 aaPredicted RBP22.45■■□□□ 1.18
LSM4-202ENST00000593564 NDC80O14777 642 aa22.45■■□□□ 1.18
LSM4-202ENST00000593564 DNAJB6O75190 326 aa22.45■■□□□ 1.18
LSM4-202ENST00000593564 BANF1O75531 89 aa22.45■■□□□ 1.18
LSM4-202ENST00000593564 SP1P08047 785 aa22.45■■□□□ 1.18
LSM4-202ENST00000593564 ENO2P09104 434 aaPredicted RBP22.45■■□□□ 1.18
LSM4-202ENST00000593564 ESRRAP11474 423 aaPredicted RBP22.45■■□□□ 1.18
LSM4-202ENST00000593564 SCTRP47872 440 aa22.45■■□□□ 1.18
LSM4-202ENST00000593564 SMSP52788 366 aa22.45■■□□□ 1.18
LSM4-202ENST00000593564 MSS51Q4VC12 460 aa22.45■■□□□ 1.18
LSM4-202ENST00000593564 CATSPEREQ5SY80 951 aa22.45■■□□□ 1.18
LSM4-202ENST00000593564 SLC25A25Q6KCM7 469 aa22.45■■□□□ 1.18
LSM4-202ENST00000593564 ABHD13Q7L211 337 aa22.45■■□□□ 1.18
LSM4-202ENST00000593564 GALNTL5Q7Z4T8 443 aa22.45■■□□□ 1.18
LSM4-202ENST00000593564 SPPL2CQ8IUH8 684 aa22.45■■□□□ 1.18
LSM4-202ENST00000593564 SIAH3Q8IW03 269 aa22.45■■□□□ 1.18
LSM4-202ENST00000593564 FAM98AQ8NCA5 519 aaKnown RBP22.45■■□□□ 1.18
LSM4-202ENST00000593564 CERS2Q96G23 380 aa22.45■■□□□ 1.18
LSM4-202ENST00000593564 TSPAN10Q9H1Z9 355 aaPredicted RBP22.45■■□□□ 1.18
LSM4-202ENST00000593564 CDCP1Q9H5V8 836 aa22.45■■□□□ 1.18
LSM4-202ENST00000593564 LRFN1Q9P244 771 aa22.45■■□□□ 1.18
LSM4-202ENST00000593564 ZFP69BQ9UJL9 534 aa22.45■■□□□ 1.18
LSM4-202ENST00000593564 CORO1CQ9ULV4 474 aaPredicted RBP22.45■■□□□ 1.18
LSM4-202ENST00000593564 NPIPA5E9PKD4 350 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 SERPIND1P05546 499 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 ZNF888P0CJ79 500 aaPredicted RBP22.44■■□□□ 1.18
LSM4-202ENST00000593564 COX6B1P14854 86 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 AHRP35869 848 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 OLR1P78380 273 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 CSHL1Q14406 222 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 HECTD2Q5U5R9 776 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 QSOX2Q6ZRP7 698 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 RPS19BP1Q86WX3 136 aaKnown RBP22.44■■□□□ 1.18
LSM4-202ENST00000593564 GPATCH11Q8N954 259 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 ADAMTS18Q8TE60 1221 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 SLC5A11Q8WWX8 675 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 NEIL2Q969S2 332 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 OSBPL9Q96SU4 736 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 SPNS1Q9H2V7 528 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 CLK4Q9HAZ1 481 aaKnown RBP22.44■■□□□ 1.18
LSM4-202ENST00000593564 SLC17A6Q9P2U8 582 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 ASIC3Q9UHC3 531 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 NPIPA1Q9UND3 350 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 VWA7Q9Y334 891 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 PDZD2O15018 2839 aa22.44■■□□□ 1.18
LSM4-202ENST00000593564 NCOA6Q14686 2063 aaPredicted RBP22.43■■□□□ 1.18
LSM4-202ENST00000593564 B4GALT2O60909 372 aa22.43■■□□□ 1.18
LSM4-202ENST00000593564 B3GALT4O96024 378 aa22.43■■□□□ 1.18
LSM4-202ENST00000593564 TEDDM1Q5T9Z0 273 aa22.43■■□□□ 1.18
LSM4-202ENST00000593564 PNPLA5Q7Z6Z6 429 aaPredicted RBP22.43■■□□□ 1.18
LSM4-202ENST00000593564 IGDCC3Q8IVU1 814 aa22.43■■□□□ 1.18
LSM4-202ENST00000593564 KIF2BQ8N4N8 673 aa22.43■■□□□ 1.18
LSM4-202ENST00000593564 UTP15Q8TED0 518 aaKnown RBP22.43■■□□□ 1.18
LSM4-202ENST00000593564 PDLIM5Q96HC4 596 aaKnown RBP22.43■■□□□ 1.18
LSM4-202ENST00000593564 PTCHD1Q96NR3 888 aa22.43■■□□□ 1.18
LSM4-202ENST00000593564 PLAC1Q9HBJ0 212 aa22.43■■□□□ 1.18
LSM4-202ENST00000593564 MEMO1Q9Y316 297 aa22.43■■□□□ 1.18
LSM4-202ENST00000593564 CSMD2Q7Z408 3487 aa22.43■■□□□ 1.18
LSM4-202ENST00000593564 DCHS2Q6V1P9 2916 aa22.42■■□□□ 1.18
LSM4-202ENST00000593564 ASNA1O43681 348 aa22.42■■□□□ 1.18
LSM4-202ENST00000593564 PRMT3O60678 531 aa22.42■■□□□ 1.18
LSM4-202ENST00000593564 SLC25A12O75746 678 aa22.42■■□□□ 1.18
LSM4-202ENST00000593564 GUCA1CO95843 209 aa22.42■■□□□ 1.18
LSM4-202ENST00000593564 TPP2P29144 1249 aaPredicted RBP22.42■■□□□ 1.18
LSM4-202ENST00000593564 PGGT1BP53609 377 aa22.42■■□□□ 1.18
LSM4-202ENST00000593564 REEP5Q00765 189 aa22.42■■□□□ 1.18
LSM4-202ENST00000593564 BBS9Q3SYG4 887 aa22.42■■□□□ 1.18
LSM4-202ENST00000593564 ZNF468Q5VIY5 522 aaPredicted RBP22.42■■□□□ 1.18
LSM4-202ENST00000593564 FAM45BPQ6NSW5 357 aa22.42■■□□□ 1.18
LSM4-202ENST00000593564 SBSNQ6UWP8 590 aa22.42■■□□□ 1.18
LSM4-202ENST00000593564 FAM45AQ8TCE6 357 aa22.42■■□□□ 1.18
LSM4-202ENST00000593564 OLFM1Q99784 485 aa22.42■■□□□ 1.18
LSM4-202ENST00000593564 TRIM51Q9BSJ1 452 aa22.42■■□□□ 1.18
LSM4-202ENST00000593564 SLC6A16Q9GZN6 736 aa22.42■■□□□ 1.18
LSM4-202ENST00000593564 TRIM45Q9H8W5 580 aaPredicted RBP22.42■■□□□ 1.18
LSM4-202ENST00000593564 PELI2Q9HAT8 420 aa22.42■■□□□ 1.18
LSM4-202ENST00000593564 PPANQ9NQ55 473 aaKnown RBP22.42■■□□□ 1.18
LSM4-202ENST00000593564 URADA6NGE7 173 aa22.41■■□□□ 1.18
LSM4-202ENST00000593564 SAGE2PA6NJ88 616 aa22.41■■□□□ 1.18
LSM4-202ENST00000593564 CES2O00748 559 aa22.41■■□□□ 1.18
LSM4-202ENST00000593564 NME2P1O60361 137 aa22.41■■□□□ 1.18
LSM4-202ENST00000593564 SNRPB2P08579 225 aaKnown RBP22.41■■□□□ 1.18
LSM4-202ENST00000593564 NME2P22392 152 aa22.41■■□□□ 1.18
LSM4-202ENST00000593564 CYB561P49447 251 aa22.41■■□□□ 1.18
LSM4-202ENST00000593564 MLF1P58340 268 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms