RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 NT5DC2Q9H857 520 aa8.7□□□□□ -1.02
DNMT1-223ENST00000591239 ATP13A2Q9NQ11 1180 aa8.7□□□□□ -1.02
DNMT1-223ENST00000591239 ZNF358Q9NW07 568 aa8.7□□□□□ -1.02
DNMT1-223ENST00000591239 GPR83Q9NYM4 423 aa8.7□□□□□ -1.02
DNMT1-223ENST00000591239 HCN3Q9P1Z3 774 aa8.7□□□□□ -1.02
DNMT1-223ENST00000591239 COPG2Q9UBF2 871 aa8.7□□□□□ -1.02
DNMT1-223ENST00000591239 OPTCQ9UBM4 332 aa8.7□□□□□ -1.02
DNMT1-223ENST00000591239 MKL2Q9ULH7 1088 aa8.7□□□□□ -1.02
DNMT1-223ENST00000591239 ZNF860A6NHJ4 632 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 ANKDD1BA6NHY2 528 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 K7EPI3 171 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 PCDH17O14917 1159 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 SLC28A2O43868 658 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 ZNF500O60304 480 aaPredicted RBP8.69□□□□□ -1.02
DNMT1-223ENST00000591239 GALR3O60755 368 aaPredicted RBP8.69□□□□□ -1.02
DNMT1-223ENST00000591239 ALOX12BO75342 701 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 JRKO75564 520 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 B3GALT4O96024 378 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 SMIM10L1P0DMW3 83 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 COL6A2P12110 1019 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 GFAPP14136 432 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 PLA2G2AP14555 144 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 ACPPP15309 386 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 CD22P20273 847 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 GSTM2P28161 218 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 CASP2P42575 452 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 XCR1P46094 333 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 EFNA3P52797 238 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 ALDH18A1P54886 795 aaKnown RBP8.69□□□□□ -1.02
DNMT1-223ENST00000591239 SOX8P57073 446 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 STXBP1P61764 594 aaKnown RBP8.69□□□□□ -1.02
DNMT1-223ENST00000591239 SKP1P63208 163 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 IRF8Q02556 426 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 CHIT1Q13231 466 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 MYBPC3Q14896 1274 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 SETDB1Q15047 1291 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 TBCCQ15814 346 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 TECRLQ5HYJ1 363 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 MFSD4BQ5TF39 518 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 FAAH2Q6GMR7 532 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 NIPAL1Q6NVV3 410 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 ADGRD1Q6QNK2 874 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 SHISA5Q8N114 240 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 TEX19Q8NA77 164 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 OR5T3Q8NGG3 340 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 MTBPQ96DY7 904 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 WDR34Q96EX3 536 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 PTCD3Q96EY7 689 aaKnown RBP8.69□□□□□ -1.02
DNMT1-223ENST00000591239 SMIM10Q96HG1 83 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 SEC16BQ96JE7 1060 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 SMAD5Q99717 465 aaKnown RBP8.69□□□□□ -1.02
DNMT1-223ENST00000591239 EFCAB11Q9BUY7 163 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 VN1R1Q9GZP7 353 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 EPB41L4BQ9H329 900 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 ANAPC2Q9UJX6 822 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 ZNF490Q9ULM2 529 aaPredicted RBP8.69□□□□□ -1.02
DNMT1-223ENST00000591239 ZNF451Q9Y4E5 1061 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 PCDHGB7Q9Y5F8 929 aa8.69□□□□□ -1.02
DNMT1-223ENST00000591239 TNRC6AQ8NDV7 1962 aaKnown RBP8.68□□□□□ -1.02
DNMT1-223ENST00000591239 A0A1W2PQ72 361 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 LRIT2A6NDA9 550 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 OR2W5A6NFC9 320 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 LRRC14BA6NHZ5 514 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 C4orf51C9J302 202 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 CHST10O43529 356 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 KLK8O60259 260 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 KLHL41O60662 606 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 DNAJB6O75190 326 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 CLEC3AO75596 197 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 WFS1O76024 890 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 HPP00738 406 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 ALPPP05187 535 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 CYC1P08574 325 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 RBP1P09455 135 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 EPB42P16452 691 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 IL10P22301 178 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 ITGA3P26006 1051 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 TNFRSF8P28908 595 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 HNRNPH1P31943 449 aaKnown RBP8.68□□□□□ -1.02
DNMT1-223ENST00000591239 CASRP41180 1078 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 RAB8AP61006 207 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 PCDH1Q08174 1060 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 Q0VFX4 171 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 KLRB1Q12918 225 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 LAPTM5Q13571 262 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 E2F2Q14209 437 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 NAA30Q147X3 362 aaPredicted RBP8.68□□□□□ -1.02
DNMT1-223ENST00000591239 HIST2H2ACQ16777 129 aaPredicted RBP8.68□□□□□ -1.02
DNMT1-223ENST00000591239 TSNAXIP1Q2TAA8 658 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 MINDY4Q4G0A6 757 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 PAGE2BQ5JRK9 111 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 TOR1AIP1Q5JTV8 583 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 COLEC12Q5KU26 742 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 VWA5B1Q5TIE3 1220 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 HIST2H2AA3Q6FI13 130 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 TMEM205Q6UW68 189 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 ATG14Q6ZNE5 492 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 TIFABQ6ZNK6 161 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 NDUFAF7Q7L592 441 aa8.68□□□□□ -1.02
DNMT1-223ENST00000591239 VN1R5Q7Z5H4 357 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms