RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 MKLN1Q9UL63 735 aa16.52■□□□□ 0.23
SMARCA4-215ENST00000590574 ZNF831Q5JPB2 1677 aa16.52■□□□□ 0.23
SMARCA4-215ENST00000590574 LEFTY1O75610 366 aa16.52■□□□□ 0.23
SMARCA4-215ENST00000590574 POP7O75817 140 aaKnown RBP16.52■□□□□ 0.23
SMARCA4-215ENST00000590574 CD72P21854 359 aa16.52■□□□□ 0.23
SMARCA4-215ENST00000590574 TMIGD1Q6UXZ0 262 aa16.52■□□□□ 0.23
SMARCA4-215ENST00000590574 GTF2H4Q92759 462 aa16.52■□□□□ 0.23
SMARCA4-215ENST00000590574 ING4Q9UNL4 249 aa16.52■□□□□ 0.23
SMARCA4-215ENST00000590574 NCKAP1Q9Y2A7 1128 aa16.52■□□□□ 0.23
SMARCA4-215ENST00000590574 URADA6NGE7 173 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 ALDH3B2P48448 385 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 ZNHIT3Q15649 155 aaPredicted RBP16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 ZNF655Q8N720 491 aaPredicted RBP16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 GJD2Q9UKL4 321 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 INTS6Q9UL03 887 aaKnown RBP16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 A0A1B0GW55 424 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 TLX2O43763 284 aaPredicted RBP16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 MMP2P08253 660 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 DUX4L2P0CJ85 424 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 DUX4L3P0CJ86 424 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 DUX4L4P0CJ87 422 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 DUX4L5P0CJ88 424 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 DUX4L6P0CJ89 424 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 DUX4L7P0CJ90 424 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 CD70P32970 193 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 LARS2Q15031 903 aaKnown RBP16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 RNF111Q6ZNA4 994 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 ZSWIM9Q86XI8 627 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 RERGQ96A58 199 aaPredicted RBP16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 TMEM80Q96HE8 168 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 GFM1Q96RP9 751 aaKnown RBP16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 DUX4Q9UBX2 424 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 PRKAB1Q9Y478 270 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 PCDHGB5Q9Y5G0 923 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 SESN1Q9Y6P5 492 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 FAM86C2PA6NEL3 165 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 SMAD6O43541 496 aaKnown RBP16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 OR10H2O60403 315 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 SAGP10523 405 aaPredicted RBP16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 BNC1Q01954 994 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 C11orf88Q6PI97 169 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 RAB8BQ92930 207 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 C12orf66Q96MD2 445 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 FEVQ99581 238 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 SLC12A9Q9BXP2 914 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 TLL1O43897 1013 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 STATHP02808 62 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 HOXD9P28356 352 aaPredicted RBP16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 AVPR1BP47901 424 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 DCDC5Q6ZRR9 648 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 GALNT13Q8IUC8 556 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 RBM12BQ8IXT5 1001 aaKnown RBP16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 GJD3Q8N144 294 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 OR9A1PQ8NGU1 263 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 KCTD7Q96MP8 289 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 GPR83Q9NYM4 423 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 SARDHQ9UL12 918 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 SLC27A6Q9Y2P4 619 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 WNT6Q9Y6F9 365 aa16.51■□□□□ 0.23
SMARCA4-215ENST00000590574 NPIPB15A6NHN6 443 aaPredicted RBP16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 TMEM189-UBE2V1I3L0A0 370 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 CACNB4O00305 520 aaPredicted RBP16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 PGRMC2O15173 223 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 SDC1P18827 310 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 IDSP22304 550 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 ZNF45Q02386 682 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 MANEALQ5VSG8 457 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 REEP3Q6NUK4 255 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 SMARCD3Q6STE5 483 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 PRSS48Q7RTY5 328 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 FAM98AQ8NCA5 519 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 PIP5K1AQ99755 562 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 SLC22A4Q9H015 551 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 EHD1Q9H4M9 534 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 CLMPQ9H6B4 373 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 OR7A17O14581 309 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 CDRT1O95170 752 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 LCKP06239 509 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 TNFRSF1BP20333 461 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 HRH2P25021 359 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 PSRC1Q6PGN9 363 aaPredicted RBP16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 RNF44Q7L0R7 432 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 HUS1BQ8NHY5 278 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 ACSL6Q9UKU0 697 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 STK25O00506 426 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 NFATC1O95644 943 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 ARF5P84085 180 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 SPCS2Q15005 226 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 Q6ZSR9 355 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 ZNF367Q7RTV3 350 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 TAS1R1Q7RTX1 841 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 KAT2AQ92830 837 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 RGMAQ96B86 450 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 TRMT61BQ9BVS5 477 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 E7EQ34 232 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 I6L893 689 aaPredicted RBP16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 ARHGEF15O94989 841 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 SLC14A2Q15849 920 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 BICRALQ6AI39 1079 aa16.5■□□□□ 0.23
SMARCA4-215ENST00000590574 MSANTD1Q6ZTZ1 278 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms