RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 AP1M2Q9Y6Q5 423 aa20.42■□□□□ 0.86
R3HDM4-206ENST00000590454 CPNE3O75131 537 aaKnown RBP20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 SERPIND1P05546 499 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 ITGAXP20702 1163 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 PIK3CGP48736 1102 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 CCNG1P51959 295 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 MLLT10P55197 1068 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 DNAJB13P59910 316 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 CLCQ05315 142 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 GRM7Q14831 915 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 RBBP7Q16576 425 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 FAM199XQ6PEV8 388 aaPredicted RBP20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 C6orf15Q6UXA7 325 aaPredicted RBP20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 TMIGD1Q6UXZ0 262 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 MYLK4Q86YV6 388 aaPredicted RBP20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 RNF175Q8N4F7 328 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 METTL27Q8N6F8 245 aaPredicted RBP20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 KCT2Q8NC54 265 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 CREB3L4Q8TEY5 395 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 SLC13A3Q8WWT9 602 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 CLIP3Q96DZ5 547 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 EFCAB11Q9BUY7 163 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 CUTCQ9NTM9 273 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 ZFP69BQ9UJL9 534 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 SEC16AO15027 2179 aa20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 USP9YO00507 2555 aaPredicted RBP20.41■□□□□ 0.86
R3HDM4-206ENST00000590454 PRPF4O43172 522 aaKnown RBP eCLIP20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 NDUFS4O43181 175 aa20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 TBX6O95947 436 aaPredicted RBP20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 HYAL2Q12891 473 aa20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 AGBL2Q5U5Z8 902 aa20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 ZNF385CQ66K41 422 aaPredicted RBP20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 GRHL2Q6ISB3 625 aa20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 RHBDD2Q6NTF9 364 aa20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 TCTN3Q6NUS6 607 aa20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 LETMD1Q6P1Q0 360 aa20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 TTLL10Q6ZVT0 673 aa20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 KRT78Q8N1N4 520 aa20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 TTC29Q8NA56 475 aaPredicted RBP20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 PPP4R1Q8TF05 950 aa20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 ATP6V1E2Q96A05 226 aa20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 CCDC126Q96EE4 140 aa20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 PKNOX2Q96KN3 472 aa20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 NDC1Q9BTX1 674 aa20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 GATA5Q9BWX5 397 aaPredicted RBP20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 STMN4Q9H169 189 aaPredicted RBP20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 NT5DC2Q9H857 520 aa20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 MLXIPLQ9NP71 852 aa20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 KCNMB2Q9Y691 235 aa20.4■□□□□ 0.86
R3HDM4-206ENST00000590454 ENO4A6NNW6 628 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 MKRN2OSH3BPM6 223 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 UBFD1O14562 309 aaKnown RBP20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 VPS4BO75351 444 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 AGFG2O95081 481 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 ALAS2P22557 587 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 CXCR2P25025 360 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 AHRP35869 848 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 ATP1A1-AS1Q5TC04 95 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 FHL5Q5TD97 284 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 LIPMQ5VYY2 423 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 PRSS41Q7RTY9 318 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 SYVN1Q86TM6 617 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 DSELQ8IZU8 1212 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 SHISA5Q8N114 240 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 L3MBTL4Q8NA19 623 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 OR4F6Q8NGB9 312 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 ZCCHC10Q8TBK6 192 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 GBP5Q96PP8 586 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 NTMT1Q9BV86 223 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 SLC7A5P2Q9GIP4 190 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 KLHL31Q9H511 634 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 NDOR1Q9UHB4 597 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 VPS4AQ9UN37 437 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 NBASA2RRP1 2371 aa20.39■□□□□ 0.85
R3HDM4-206ENST00000590454 TMEM120BA0PK00 339 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 WDR91A4D1P6 747 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 C4orf51C9J302 202 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 MEN1O00255 615 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 OR4F21O95013 312 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 CLDN9O95484 217 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 B3GALT4O96024 378 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 BPGMP07738 259 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 PCNAP12004 261 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 NR1D1P20393 614 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 ARL1P40616 181 aaPredicted RBP20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 HNF4AP41235 474 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 LAPTM5Q13571 262 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 SLC9A5Q14940 896 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 CPSF6Q16630 551 aaKnown RBP eCLIP20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 PAGE2BQ5JRK9 111 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 LIPJQ5W064 366 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 CES4AQ5XG92 561 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 TMEM214Q6NUQ4 689 aaKnown RBP20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 MED27Q6P2C8 311 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 ZCCHC23Q6ZST2 131 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 LAS2Q8IYD9 372 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 TBC1D19Q8N5T2 526 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 ESX1Q8N693 406 aa20.38■□□□□ 0.85
R3HDM4-206ENST00000590454 ANKRD42Q8N9B4 389 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms