RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 OR6C68A6NDL8 312 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 ARHGAP42A6NI28 874 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 BTNL10A8MVZ5 291 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 LIASO43766 372 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 HNRNPCL1O60812 293 aaKnown RBP7.48□□□□□ -1.21
ATG4D-210ENST00000588972 PAGE4O60829 102 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 TMCC1O94876 653 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 SEC31AO94979 1220 aaKnown RBP7.48□□□□□ -1.21
ATG4D-210ENST00000588972 PEX11BO96011 259 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 IL1BP01584 269 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 ELFN1P0C7U0 828 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 KDELR1P24390 212 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 SLC1A1P43005 524 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 NDST2P52849 883 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 UCNP55089 124 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 YBEYP58557 167 aaPredicted RBP7.48□□□□□ -1.21
ATG4D-210ENST00000588972 CYP4F2P78329 520 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 ELAVL3Q14576 367 aaKnown RBP7.48□□□□□ -1.21
ATG4D-210ENST00000588972 CST6Q15828 149 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 FAM182AQ5T1J6 154 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 C11orf63Q6NUN7 778 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 TMEM154Q6P9G4 183 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 DCDC5Q6ZRR9 648 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 RFX6Q8HWS3 928 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 AADATQ8N5Z0 425 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 EID2Q8N6I1 236 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 PQLC3Q8N755 202 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 ZNF248Q8NDW4 579 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 CCDC112Q8NEF3 446 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 GANCQ8TET4 914 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 OR8D1Q8WZ84 308 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 KRT35Q92764 455 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 FAF2Q96CS3 445 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 HIC2Q96JB3 615 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 PDLIM2Q96JY6 352 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 ZNF830Q96NB3 372 aaPredicted RBP7.48□□□□□ -1.21
ATG4D-210ENST00000588972 ZNF347Q96SE7 839 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 MACROD1Q9BQ69 325 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 ZNF670Q9BS34 389 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 ZDHHC6Q9H6R6 413 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 GDF3Q9NR23 364 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 SNTG1Q9NSN8 517 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 UBA2Q9UBT2 640 aaPredicted RBP7.48□□□□□ -1.21
ATG4D-210ENST00000588972 TESMINQ9Y4I5 508 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 LRRK2Q5S007 2527 aa7.48□□□□□ -1.21
ATG4D-210ENST00000588972 TLN1Q9Y490 2541 aaKnown RBP7.48□□□□□ -1.21
ATG4D-210ENST00000588972 ARID1BQ8NFD5 2236 aaPredicted RBP7.48□□□□□ -1.21
ATG4D-210ENST00000588972 LRRC72A6NJI9 287 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 DBX1A6NMT0 343 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 KPNA3O00505 521 aaPredicted RBP7.47□□□□□ -1.21
ATG4D-210ENST00000588972 MCF2LO15068 1137 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 INSIG1O15503 277 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 PSTPIP1O43586 416 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 PRAMEF11O60813 436 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 RNASEH1O60930 286 aaKnown RBP7.47□□□□□ -1.21
ATG4D-210ENST00000588972 PALMO75781 387 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 FTCDO95954 541 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 APOA4P06727 396 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 ENO1P06733 434 aaKnown RBP7.47□□□□□ -1.21
ATG4D-210ENST00000588972 KRT10P13645 584 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 CD38P28907 300 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 CHRNA3P32297 505 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 SERPINB6P35237 376 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 PTGS2P35354 604 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 DRD3P35462 400 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 RGRP47804 291 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 CCNHP51946 323 aaPredicted RBP7.47□□□□□ -1.21
ATG4D-210ENST00000588972 RHOAP61586 193 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 DYNLT1P63172 113 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 BLOC1S1P78537 153 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 GBE1Q04446 702 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 SLC20A2Q08357 652 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 KIF5AQ12840 1032 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 AIMP2Q13155 320 aaKnown RBP7.47□□□□□ -1.21
ATG4D-210ENST00000588972 PAFAH1B3Q15102 231 aaKnown RBP7.47□□□□□ -1.21
ATG4D-210ENST00000588972 PDK2Q15119 407 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 CYTH1Q15438 398 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 SHBQ15464 509 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 CARD16Q5EG05 197 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 ARL13AQ5H913 290 aaPredicted RBP7.47□□□□□ -1.21
ATG4D-210ENST00000588972 LRRC38Q5VT99 294 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 GPR139Q6DWJ6 353 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 MFSD7Q6UXD7 560 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 NAPRTQ6XQN6 538 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 MAP7D3Q8IWC1 876 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 PALM2Q8IXS6 379 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 RYBPQ8N488 228 aaPredicted RBP7.47□□□□□ -1.21
ATG4D-210ENST00000588972 ATPAF2Q8N5M1 289 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 PCDH20Q8N6Y1 951 aaKnown RBP7.47□□□□□ -1.21
ATG4D-210ENST00000588972 LRRC57Q8N9N7 239 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 DNAAF1Q8NEP3 725 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 PROKR1Q8TCW9 393 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 VOPP1Q96AW1 172 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 ADAD1Q96M93 576 aaKnown RBP7.47□□□□□ -1.21
ATG4D-210ENST00000588972 OMDQ99983 421 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 MLST8Q9BVC4 326 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 FBXL12Q9NXK8 326 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 NCKIPSDQ9NZQ3 722 aa7.47□□□□□ -1.21
ATG4D-210ENST00000588972 RCOR3Q9P2K3 495 aaPredicted RBP7.47□□□□□ -1.21
ATG4D-210ENST00000588972 NLKQ9UBE8 527 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms