RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 HNRNPFP52597 415 aaKnown RBP10.89□□□□□ -0.67
SMAD4-205ENST00000588745 ARFIP1P53367 373 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 RELAQ04206 551 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 HYAL2Q12891 473 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 SHBQ15464 509 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 PGS1Q32NB8 556 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 C6orf10Q5SRN2 563 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 LRIF1Q5T3J3 769 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 OR4F3Q6IEY1 312 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 FAM71E1Q6IPT2 247 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 DLEU7Q6UYE1 221 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 CEP68Q76N32 757 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 RNF44Q7L0R7 432 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 VN1R4Q7Z5H5 301 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 UBE3DQ7Z6J8 389 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 ASPGQ86U10 573 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.89□□□□□ -0.67
SMAD4-205ENST00000588745 SLC15A3Q8IY34 581 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 KIAA2013Q8IYS2 634 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 TMEM132CQ8N3T6 1108 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 RNF148Q8N7C7 305 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 ARL10Q8N8L6 244 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 OR7A2PQ8NGA2 310 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 OR8J2Q8NGG1 315 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 DNAJB8Q8NHS0 232 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 BAHD1Q8TBE0 780 aaPredicted RBP10.89□□□□□ -0.67
SMAD4-205ENST00000588745 PIGKQ92643 395 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 ZUFSPQ96AP4 578 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 TMEM125Q96AQ2 219 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 ITCHQ96J02 903 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 ZC3H10Q96K80 434 aaKnown RBP10.89□□□□□ -0.67
SMAD4-205ENST00000588745 SLC38A3Q99624 504 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 CGREF1Q99674 301 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 KCNH6Q9H252 994 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 REEP4Q9H6H4 257 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 LHX9Q9NQ69 397 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 FAM120CQ9NX05 1096 aaKnown RBP10.89□□□□□ -0.67
SMAD4-205ENST00000588745 CMTM6Q9NX76 183 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 ATP6V1HQ9UI12 483 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 NEUROG3Q9Y4Z2 214 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 PCDHA9Q9Y5H5 950 aa10.89□□□□□ -0.67
SMAD4-205ENST00000588745 VCANP13611 3396 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 KNL1Q8NG31 2342 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 A0A096LPI6 279 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 ARHGAP10A1A4S6 786 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 BDP1A6H8Y1 2624 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 PRORSD1PA6NEY8 169 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 C4orf51C9J302 202 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 CTSVO60911 334 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 STATHP02808 62 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 PROS1P07225 676 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 IL3P08700 152 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 SLC35G6P0C7Q6 338 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 PIM1P11309 404 aaPredicted RBP10.88□□□□□ -0.67
SMAD4-205ENST00000588745 PVRP15151 417 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 SSR2P43308 183 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 MAPK12P53778 367 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 EPHA4P54764 986 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 WNT3P56703 355 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 TAS2R50P59544 299 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 STXBP1P61764 594 aaKnown RBP10.88□□□□□ -0.67
SMAD4-205ENST00000588745 PPP1CAP62136 330 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 RGS1Q08116 209 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 C2orf80Q0P641 193 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 BNIP3Q12983 259 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 PDE7AQ13946 482 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 MDC1Q14676 2089 aaKnown RBP10.88□□□□□ -0.67
SMAD4-205ENST00000588745 CACNA1EQ15878 2313 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 SNCBQ16143 134 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 ZNF528Q3MIS6 628 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 SPATS1Q496A3 300 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 RABL3Q5HYI8 236 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 TOR1AIP1Q5JTV8 583 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 CCNYL2Q5T2Q4 361 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 CPTPQ5TA50 214 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 OR4C11Q6IEV9 310 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 DNAJC14Q6Y2X3 702 aaPredicted RBP10.88□□□□□ -0.67
SMAD4-205ENST00000588745 R3HCC1LQ7Z5L2 792 aaKnown RBP10.88□□□□□ -0.67
SMAD4-205ENST00000588745 SLC25A45Q8N413 288 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 OR2L5Q8NG80 312 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 DNAJB14Q8TBM8 379 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 NT5CQ8TCD5 201 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 JADE3Q92613 823 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 STMN2Q93045 179 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 GAL3ST3Q96A11 431 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 MS4A6EQ96DS6 147 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 ASB9Q96DX5 294 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 MTERF3Q96E29 417 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 THAP11Q96EK4 314 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 PPM1MQ96MI6 270 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 FCRL4Q96PJ5 515 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 OR2A5Q96R48 311 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 PRPF18Q99633 342 aaKnown RBP10.88□□□□□ -0.67
SMAD4-205ENST00000588745 ZFYVE21Q9BQ24 234 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 C17orf62Q9BQA9 187 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 DUSP26Q9BV47 211 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 SLC6A16Q9GZN6 736 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 KLHL25Q9H0H3 589 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 ABCG4Q9H172 646 aa10.88□□□□□ -0.67
SMAD4-205ENST00000588745 RASSF4Q9H2L5 321 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms