RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 HERC3Q15034 1050 aa19.15■□□□□ 0.66
DDX39A-207ENST00000588542 HIST2H2ACQ16777 129 aaPredicted RBP19.15■□□□□ 0.66
DDX39A-207ENST00000588542 DEFB109BQ30KR1 87 aa19.15■□□□□ 0.66
DDX39A-207ENST00000588542 VWA2Q5GFL6 755 aa19.15■□□□□ 0.66
DDX39A-207ENST00000588542 TOR1AIP1Q5JTV8 583 aa19.15■□□□□ 0.66
DDX39A-207ENST00000588542 LIPJQ5W064 366 aa19.15■□□□□ 0.66
DDX39A-207ENST00000588542 HIST2H2AA3Q6FI13 130 aa19.15■□□□□ 0.66
DDX39A-207ENST00000588542 PCSK4Q6UW60 755 aa19.15■□□□□ 0.66
DDX39A-207ENST00000588542 L3MBTL4Q8NA19 623 aa19.15■□□□□ 0.66
DDX39A-207ENST00000588542 OR7G3Q8NG95 312 aa19.15■□□□□ 0.66
DDX39A-207ENST00000588542 OR52B6Q8NGF0 335 aa19.15■□□□□ 0.66
DDX39A-207ENST00000588542 STT3BQ8TCJ2 826 aa19.15■□□□□ 0.66
DDX39A-207ENST00000588542 EXTL1Q92935 676 aa19.15■□□□□ 0.66
DDX39A-207ENST00000588542 ZIM3Q96PE6 472 aa19.15■□□□□ 0.66
DDX39A-207ENST00000588542 ANKHQ9HCJ1 492 aa19.15■□□□□ 0.66
DDX39A-207ENST00000588542 MKS1Q9NXB0 559 aa19.15■□□□□ 0.66
DDX39A-207ENST00000588542 TRPC4Q9UBN4 977 aa19.15■□□□□ 0.66
DDX39A-207ENST00000588542 ZNF282Q9UDV7 671 aaPredicted RBP19.15■□□□□ 0.66
DDX39A-207ENST00000588542 LRIT2A6NDA9 550 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 UGDHO60701 494 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 GALR3O60755 368 aaPredicted RBP19.14■□□□□ 0.65
DDX39A-207ENST00000588542 ZGLP1P0C6A0 271 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 PRKAA2P54646 552 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 HERVK_113P63132 956 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 TRAF3Q13114 568 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 SSPNQ14714 243 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 ADPRMQ3LIE5 342 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 LINC00303Q3SY05 128 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 CCDC153Q494R4 210 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 UNC50Q53HI1 259 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 ZNF678Q5SXM1 525 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 BEND6Q5SZJ8 279 aaPredicted RBP19.14■□□□□ 0.65
DDX39A-207ENST00000588542 MED27Q6P2C8 311 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 SHISA6Q6ZSJ9 500 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 SRRM1Q8IYB3 904 aaKnown RBP19.14■□□□□ 0.65
DDX39A-207ENST00000588542 BANPQ8N9N5 519 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 ZNF473Q8WTR7 871 aaKnown RBP19.14■□□□□ 0.65
DDX39A-207ENST00000588542 TMEM237Q96Q45 408 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 NTMT1Q9BV86 223 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 ERVK-6Q9BXR3 956 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 TGIF2Q9GZN2 237 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 SOX17Q9H6I2 414 aaPredicted RBP19.14■□□□□ 0.65
DDX39A-207ENST00000588542 ACTR8Q9H981 624 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 ACSS2Q9NR19 701 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 NXT1Q9UKK6 140 aaKnown RBP19.14■□□□□ 0.65
DDX39A-207ENST00000588542 POLHQ9Y253 713 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 RNF11Q9Y3C5 154 aa19.14■□□□□ 0.65
DDX39A-207ENST00000588542 A0A1B0GTL3 188 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 PPP6CO00743 305 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 DNAJB6O75190 326 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 RDH16O75452 317 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 ERLIN1O75477 346 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 IMPDH1P20839 514 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 RAB8AP61006 207 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 OCA2Q04671 838 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 KLC1Q07866 573 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 KRT71Q3SY84 523 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 DEFB134Q4QY38 66 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 ZYG11AQ6WRX3 759 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 ABHD13Q7L211 337 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 LAPTM4BQ86VI4 370 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 SLC22A9Q8IVM8 553 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 ZC3H7AQ8IWR0 971 aaKnown RBP19.13■□□□□ 0.65
DDX39A-207ENST00000588542 CCT6BQ92526 530 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 UBE2E3Q969T4 207 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 MIEF2Q96C03 454 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 MS4A6EQ96DS6 147 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 APOPT1Q96IL0 206 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 CDK15Q96Q40 435 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 YIPF2Q9BWQ6 316 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 MKKSQ9NPJ1 570 aaPredicted RBP19.13■□□□□ 0.65
DDX39A-207ENST00000588542 SEMA4BQ9NPR2 832 aaPredicted RBP19.13■□□□□ 0.65
DDX39A-207ENST00000588542 HCN3Q9P1Z3 774 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 KCNMB2Q9Y691 235 aa19.13■□□□□ 0.65
DDX39A-207ENST00000588542 SMG1Q96Q15 3661 aaKnown RBP19.12■□□□□ 0.65
DDX39A-207ENST00000588542 BSNQ9UPA5 3926 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 URADA6NGE7 173 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 ZNF860A6NHJ4 632 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 H0YIV9 168 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 ERVH48-1M5A8F1 160 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 CLDN9O95484 217 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 PCNAP12004 261 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 CREB1P16220 341 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 TSPAN8P19075 237 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 OTX2P32243 289 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 CCNG1P51959 295 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 EFNA3P52797 238 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 CDH13P55290 713 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 STXBP1P61764 594 aaKnown RBP19.12■□□□□ 0.65
DDX39A-207ENST00000588542 BORAQ6PGQ7 559 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 PPP1R32Q7Z5V6 425 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 MYLK4Q86YV6 388 aaPredicted RBP19.12■□□□□ 0.65
DDX39A-207ENST00000588542 PRSS58Q8IYP2 241 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 RNF175Q8N4F7 328 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 OR5T3Q8NGG3 340 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 OR51Q1Q8NH59 317 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 THAP4Q8WY91 577 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 GAL3ST3Q96A11 431 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 L3HYPDHQ96EM0 354 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 MS4A8Q9BY19 250 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms