RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 POU5F2Q8N7G0 328 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 KCT2Q8NC54 265 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 TRPV3Q8NET8 790 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 CLHC1Q8NHS4 586 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 NUDT8Q8WV74 236 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 MS4A6EQ96DS6 147 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 TCTN2Q96GX1 697 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 METTL2AQ96IZ6 378 aaKnown RBP10.78□□□□□ -0.68
VMP1-207ENST00000588131 SLC6A16Q9GZN6 736 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 REXO4Q9GZR2 422 aaKnown RBP10.78□□□□□ -0.68
VMP1-207ENST00000588131 SYNDIG1Q9H7V2 258 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 SIRT5Q9NXA8 310 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 SEMA5BQ9P283 1151 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 RUVBL1Q9Y265 456 aaKnown RBP10.78□□□□□ -0.68
VMP1-207ENST00000588131 TMED5Q9Y3A6 229 aa10.78□□□□□ -0.68
VMP1-207ENST00000588131 MDC1Q14676 2089 aaKnown RBP10.78□□□□□ -0.68
VMP1-207ENST00000588131 CABIN1Q9Y6J0 2220 aa10.77□□□□□ -0.68
VMP1-207ENST00000588131 C4orf47A7E2U8 309 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 PCDH7O60245 1069 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 LRP3O75074 770 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 EEDO75530 441 aaKnown RBP10.77□□□□□ -0.69
VMP1-207ENST00000588131 MYO1DO94832 1006 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 ZBTB11O95625 1053 aaPredicted RBP10.77□□□□□ -0.69
VMP1-207ENST00000588131 CPNE6O95741 557 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 B3GALT4O96024 378 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 EIF2S1P05198 315 aaKnown RBP10.77□□□□□ -0.69
VMP1-207ENST00000588131 KLK1P06870 262 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 PRPS2P11908 318 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 COX4I1P13073 169 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 MAPK1P28482 360 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 TPP2P29144 1249 aaPredicted RBP10.77□□□□□ -0.69
VMP1-207ENST00000588131 ADSLP30566 484 aaPredicted RBP10.77□□□□□ -0.69
VMP1-207ENST00000588131 MLLT3P42568 568 aaPredicted RBP10.77□□□□□ -0.69
VMP1-207ENST00000588131 CPA2P48052 419 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 SEPHS1P49903 392 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 RAP1GDS1P52306 607 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 VSX2P58304 361 aaPredicted RBP10.77□□□□□ -0.69
VMP1-207ENST00000588131 IRX1P78414 480 aaPredicted RBP10.77□□□□□ -0.69
VMP1-207ENST00000588131 RGS1Q08116 209 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 BNIP1Q12981 228 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 SLC14A1Q13336 389 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 PWP1Q13610 501 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 KCNAB1Q14722 419 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 AASDHQ4L235 1098 aaPredicted RBP10.77□□□□□ -0.69
VMP1-207ENST00000588131 TMEM35AQ53FP2 167 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 TMEM71Q6P5X7 295 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 GALNT18Q6P9A2 607 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 PRSS42Q7Z5A4 293 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 SNX32Q86XE0 403 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 MCATQ8IVS2 390 aaKnown RBP10.77□□□□□ -0.69
VMP1-207ENST00000588131 NAXDQ8IW45 347 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 CSNK1A1LQ8N752 337 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 AMER3Q8N944 861 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 PROKR1Q8TCW9 393 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 RERGQ96A58 199 aaPredicted RBP10.77□□□□□ -0.69
VMP1-207ENST00000588131 RGMAQ96B86 450 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 EGLN2Q96KS0 407 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 TSSK3Q96PN8 268 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 TEFMQ96QE5 360 aaKnown RBP10.77□□□□□ -0.69
VMP1-207ENST00000588131 C17orf62Q9BQA9 187 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 IRF2BPLQ9H1B7 796 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 OCEL1Q9H607 264 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 STARD5Q9NSY2 213 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 SOHLH2Q9NX45 425 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 ZIM2Q9NZV7 527 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 CCDC167Q9P0B6 97 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 FTSJ1Q9UET6 329 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 TAGLN3Q9UI15 199 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 MRPS2Q9Y399 296 aaKnown RBP10.77□□□□□ -0.69
VMP1-207ENST00000588131 HCN4Q9Y3Q4 1203 aa10.77□□□□□ -0.69
VMP1-207ENST00000588131 LOC100653049A0A140TA62 436 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 ERI3O43414 337 aaKnown RBP10.76□□□□□ -0.69
VMP1-207ENST00000588131 GDF9O60383 454 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 CBFA2T3O75081 653 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 SLC22A3O75751 556 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 KRT34O76011 436 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 LRATO95237 230 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 ANXA4P09525 319 aaPredicted RBP10.76□□□□□ -0.69
VMP1-207ENST00000588131 SLC35G6P0C7Q6 338 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 ZNF888P0CJ79 500 aaPredicted RBP10.76□□□□□ -0.69
VMP1-207ENST00000588131 SMIM10L1P0DMW3 83 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 JAK1P23458 1154 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 ACP1P24666 158 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 PRDX6P30041 224 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 ACADVLP49748 655 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 PLA2G16P53816 162 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 RAB8AP61006 207 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 HERC3Q15034 1050 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 LACTB2Q53H82 288 aaPredicted RBP10.76□□□□□ -0.69
VMP1-207ENST00000588131 ZC3H12BQ5HYM0 836 aaKnown RBP10.76□□□□□ -0.69
VMP1-207ENST00000588131 LCE2DQ5TA82 110 aaPredicted RBP10.76□□□□□ -0.69
VMP1-207ENST00000588131 ABHD17CQ6PCB6 329 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 ZNF793Q6ZN11 406 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 NUDT13Q86X67 352 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 PARP9Q8IXQ6 854 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 CARFQ8N187 725 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 KRTCAP2Q8N6L1 136 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 CAMKVQ8NCB2 501 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 OR2L5Q8NG80 312 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 CDC26Q8NHZ8 85 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms