RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 UGT2A1Q9Y4X1 527 aa13.65□□□□□ -0.22
CDK5RAP3-237ENST00000585163 GNG14A0A1W2PPG7 69 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SAGE2PA6NJ88 616 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 GRM6O15303 877 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TNFRSF21O75509 655 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SLC16A8O95907 504 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 OPN1SWP03999 348 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 URODP06132 367 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 GABRB1P18505 474 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CRATP43155 626 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 COX20Q5RI15 118 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SPOUT1Q5T280 376 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 GDPD4Q6W3E5 623 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 Q6ZVL8 140 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 Q6ZVU0 165 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SLC39A11Q8N1S5 342 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 DENND6BQ8NEG7 585 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 GPR156Q8NFN8 814 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 OR56A3Q8NH54 315 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF675Q8TD23 568 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PXYLP1Q8TE99 480 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 FOXJ1Q92949 421 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CXorf40BQ96DE9 158 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 BHLHE41Q9C0J9 482 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 NXF2Q9GZY0 626 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 HMX1Q9NP08 348 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 RAD18Q9NS91 495 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 DENND4CQ5VZ89 1909 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 INHAP05111 366 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 RPLP0P05388 317 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ETFAP13804 333 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TNFRSF1BP20333 461 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 HOXD10P28358 340 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 IMPA1P29218 277 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 IDH2P48735 452 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CCL23P55773 120 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 HBA1P69905 142 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 E2F2Q14209 437 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ELOAQ14241 798 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 MICAQ29983 383 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF181Q2M3W8 571 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 FBXO43Q4G163 708 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 IFI44LQ53G44 452 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF385BQ569K4 471 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF648Q5T619 568 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF852Q6ZMS4 543 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 AMER2Q8N7J2 671 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TMEM159Q96B96 161 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 NIPSNAP1Q9BPW8 284 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ABCB10Q9NRK6 738 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 THSD1Q9NS62 852 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SACM1LQ9NTJ5 587 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 GPR83Q9NYM4 423 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF226Q9NYT6 803 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ATP6V1HQ9UI12 483 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF229Q9UJW7 825 aa13.64□□□□□ -0.23
CDK5RAP3-237ENST00000585163 A8MVJ9 347 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 LEFTY2O00292 366 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 NPC1O15118 1278 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TSPAN6O43657 245 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CATP04040 527 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CTSAP10619 480 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 FUT4P22083 530 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 GRK5P34947 590 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 OR1E2P47887 323 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 LIMK1P53667 647 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CDH12P55289 794 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SYTL3Q4VX76 610 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ASTLQ6HA08 431 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 BRAT1Q6PJG6 821 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ANGPTL8Q6UXH0 198 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF605Q86T29 641 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 DEPDC4Q8N2C3 294 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 OR52J3Q8NH60 311 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TIFAQ96CG3 184 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 COL21A1Q96P44 957 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PRDM8Q9NQV8 689 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ITGB1BP2Q9UKP3 347 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ABT1Q9ULW3 272 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 RABL2BQ9UNT1 228 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 FAM32AQ9Y421 112 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PRAMEF25A6NGN4 478 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 FADS2P1A8MWK0 482 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 QSOX1O00391 747 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 NRG2O14511 850 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 DSCR3O14972 297 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 AOC2O75106 756 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 STSP08842 583 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ADORA3P0DMS8 318 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CYP2A6P11509 494 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SERPINB1P30740 379 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 VIPR1P32241 457 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ETV3P41162 512 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PREPP48147 710 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 NUDT6P53370 316 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 RPS13P62277 151 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SPIBQ01892 262 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 RBBP4Q09028 425 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SLC13A2Q13183 592 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms