RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 ATAT1Q5SQI0 421 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 C6orf141Q5SZD1 244 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 ARTNQ5T4W7 220 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 CEP68Q76N32 757 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 SLCO6A1Q86UG4 719 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 LGI4Q8N135 537 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 SMARCD2Q92925 531 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 SAMD11Q96NU1 681 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 RETREG1Q9H6L5 497 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 PREBQ9HCU5 417 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 J3KTA2 159 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 PPM1DO15297 605 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 PRAMEF4O60810 478 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 WISP3O95389 354 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-217ENST00000584582 C9P02748 559 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 PPP2R1BP30154 601 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 CCR3P51677 355 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 TXNL4AP83876 142 aaKnown RBP10.86□□□□□ -0.67
TOP3A-217ENST00000584582 GSTM4Q03013 218 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 LSAMPQ13449 338 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 COX20Q5RI15 118 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 PRAMEF9Q5VWM5 478 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 SNX29P2Q8IUI4 249 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 CCDC116Q8IYX3 515 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 ZCCHC7Q8N3Z6 543 aaKnown RBP10.86□□□□□ -0.67
TOP3A-217ENST00000584582 TERB1Q8NA31 727 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 HM13Q8TCT9 377 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 EFCAB11Q9BUY7 163 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 CEP44Q9C0F1 390 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 TRIT1Q9H3H1 467 aaKnown RBP10.86□□□□□ -0.67
TOP3A-217ENST00000584582 MARCH7Q9H992 704 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 CD320Q9NPF0 282 aa10.86□□□□□ -0.67
TOP3A-217ENST00000584582 A0A0J9YVX5 310 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 TRBC2A0A5B9 178 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 FAM227AF5H4B4 570 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 NDUFS4O43181 175 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 CD22P20273 847 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 CD9P21926 228 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 EPHA2P29317 976 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 PBX2P40425 430 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 SEPHS1P49903 392 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 ERVK-21P61565 698 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 LRRC32Q14392 662 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 LASP1Q14847 261 aaKnown RBP10.85□□□□□ -0.67
TOP3A-217ENST00000584582 LIPJQ5W064 366 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 OR4N5Q8IXE1 308 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 PSD4Q8NDX1 1056 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 OR10G2Q8NGC3 310 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 OR9Q2Q8NGE9 314 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 LCN9Q8WX39 176 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 ZNF689Q96CS4 500 aaPredicted RBP10.85□□□□□ -0.67
TOP3A-217ENST00000584582 FEVQ99581 238 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 CHCHD6Q9BRQ6 235 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 RHNO1Q9BSD3 238 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 TRPM6Q9BX84 2022 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 LGR4Q9BXB1 951 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 CLDND1Q9NY35 253 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 NYNRINQ9P2P1 1898 aaKnown RBP10.85□□□□□ -0.67
TOP3A-217ENST00000584582 SH2B3Q9UQQ2 575 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 KLK8O60259 260 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 IFNA14P01570 189 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 RPN2P04844 631 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 KELP23276 732 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 GJA8P48165 433 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 HNRNPA1L2Q32P51 320 aaKnown RBP10.85□□□□□ -0.67
TOP3A-217ENST00000584582 SLC36A3Q495N2 470 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 COQ5Q5HYK3 327 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 MFSD4BQ5TF39 518 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 TYW3Q6IPR3 259 aaKnown RBP10.85□□□□□ -0.67
TOP3A-217ENST00000584582 LILRA6Q6PI73 481 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 EIF3MQ7L2H7 374 aaKnown RBP10.85□□□□□ -0.67
TOP3A-217ENST00000584582 PAGE2Q7Z2X7 111 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 TMEM179BQ7Z7N9 219 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 TMEM126BQ8IUX1 230 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 PACRGLQ8N7B6 248 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 PSMA8Q8TAA3 256 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 DTD2Q96FN9 168 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 PLEKHA8Q96JA3 519 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 OR4K3Q96R72 315 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 ANKRA2Q9H9E1 313 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 ABCB10Q9NRK6 738 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 SEMA3GQ9NS98 782 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 GIMAP4Q9NUV9 329 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 ENTPD4Q9Y227 616 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 ANGPT4Q9Y264 503 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 LYVE1Q9Y5Y7 322 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 CKAP5Q14008 2032 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 A0A1W2PQU0 124 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 GREM1O60565 184 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 GADD45GO95257 159 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 ATE1O95260 518 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 C1orf105O95561 183 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 FGF19O95750 216 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 IDSP22304 550 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 MYF6P23409 242 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 RPS3AP61247 264 aaKnown RBP10.85□□□□□ -0.67
TOP3A-217ENST00000584582 TMEM240Q5SV17 173 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 FBXO46Q6PJ61 603 aaPredicted RBP10.85□□□□□ -0.67
TOP3A-217ENST00000584582 PTCHD4Q6ZW05 846 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 CYP4Z1Q86W10 505 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms