RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 TMEM102Q8N9M5 508 aaPredicted RBP23.58■■□□□ 1.37
TSEN54-209ENST00000583454 ANKRD53Q8N9V6 530 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 ZNF304Q9HCX3 659 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 PADI2Q9Y2J8 665 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 MRPS2Q9Y399 296 aaKnown RBP23.58■■□□□ 1.37
TSEN54-209ENST00000583454 ZNF451Q9Y4E5 1061 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 TNPO3Q9Y5L0 923 aaKnown RBP23.58■■□□□ 1.37
TSEN54-209ENST00000583454 SCN3AQ9NY46 2000 aa23.58■■□□□ 1.37
TSEN54-209ENST00000583454 DOCK10Q96BY6 2186 aa23.58■■□□□ 1.36
TSEN54-209ENST00000583454 BLACEA4D250 179 aa23.57■■□□□ 1.36
TSEN54-209ENST00000583454 WFS1O76024 890 aa23.57■■□□□ 1.36
TSEN54-209ENST00000583454 SNRPNP63162 240 aaKnown RBP23.57■■□□□ 1.36
TSEN54-209ENST00000583454 DOC2AQ14183 400 aa23.57■■□□□ 1.36
TSEN54-209ENST00000583454 SLBPQ14493 270 aaKnown RBP eCLIP23.57■■□□□ 1.36
TSEN54-209ENST00000583454 JMJD6Q6NYC1 403 aaPredicted RBP23.57■■□□□ 1.36
TSEN54-209ENST00000583454 MRGPREQ86SM8 312 aa23.57■■□□□ 1.36
TSEN54-209ENST00000583454 METTL27Q8N6F8 245 aaPredicted RBP23.57■■□□□ 1.36
TSEN54-209ENST00000583454 RBMXL3Q8N7X1 1067 aaKnown RBP23.57■■□□□ 1.36
TSEN54-209ENST00000583454 KCT2Q8NC54 265 aa23.57■■□□□ 1.36
TSEN54-209ENST00000583454 TRPV3Q8NET8 790 aa23.57■■□□□ 1.36
TSEN54-209ENST00000583454 OR2W6PQ8NHA6 318 aa23.57■■□□□ 1.36
TSEN54-209ENST00000583454 NT5CQ8TCD5 201 aa23.57■■□□□ 1.36
TSEN54-209ENST00000583454 MOCOSQ96EN8 888 aa23.57■■□□□ 1.36
TSEN54-209ENST00000583454 DRC3Q9H069 523 aa23.57■■□□□ 1.36
TSEN54-209ENST00000583454 TMEM216Q9P0N5 145 aa23.57■■□□□ 1.36
TSEN54-209ENST00000583454 DOPEY1Q5JWR5 2465 aa23.57■■□□□ 1.36
TSEN54-209ENST00000583454 SMIM23A6NLE4 172 aa23.56■■□□□ 1.36
TSEN54-209ENST00000583454 GOLGA8RI6L899 631 aa23.56■■□□□ 1.36
TSEN54-209ENST00000583454 GSTA1P08263 222 aa23.56■■□□□ 1.36
TSEN54-209ENST00000583454 SLC35G6P0C7Q6 338 aa23.56■■□□□ 1.36
TSEN54-209ENST00000583454 DSG2Q14126 1118 aa23.56■■□□□ 1.36
TSEN54-209ENST00000583454 RBBP5Q15291 538 aaKnown RBP23.56■■□□□ 1.36
TSEN54-209ENST00000583454 XKR6Q5GH73 641 aa23.56■■□□□ 1.36
TSEN54-209ENST00000583454 TMIGD1Q6UXZ0 262 aa23.56■■□□□ 1.36
TSEN54-209ENST00000583454 KRT78Q8N1N4 520 aa23.56■■□□□ 1.36
TSEN54-209ENST00000583454 PTGR2Q8N8N7 351 aaPredicted RBP23.56■■□□□ 1.36
TSEN54-209ENST00000583454 PTCD3Q96EY7 689 aaKnown RBP23.56■■□□□ 1.36
TSEN54-209ENST00000583454 SMAD5Q99717 465 aaKnown RBP23.56■■□□□ 1.36
TSEN54-209ENST00000583454 EFCAB11Q9BUY7 163 aa23.56■■□□□ 1.36
TSEN54-209ENST00000583454 ROPN1BQ9BZX4 212 aaPredicted RBP23.56■■□□□ 1.36
TSEN54-209ENST00000583454 WDR54Q9H977 334 aa23.56■■□□□ 1.36
TSEN54-209ENST00000583454 ROPN1Q9HAT0 212 aaPredicted RBP23.56■■□□□ 1.36
TSEN54-209ENST00000583454 SLC22A7Q9Y694 548 aa23.56■■□□□ 1.36
TSEN54-209ENST00000583454 MAU2Q9Y6X3 613 aa23.56■■□□□ 1.36
TSEN54-209ENST00000583454 ITPR2Q14571 2701 aa23.56■■□□□ 1.36
TSEN54-209ENST00000583454 LRRC14BA6NHZ5 514 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 A6NL46 340 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 FOXO6A8MYZ6 492 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 STX16-NPEPL1H3BU86 382 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 STX16O14662 325 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 NDUFS4O43181 175 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 SMIM24O75264 130 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 EPB42P16452 691 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 KRT15P19012 456 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 CD22P20273 847 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 FOXL2P58012 376 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 IRF8Q02556 426 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 CHIT1Q13231 466 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 NKG7Q16617 165 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 SLC6A19Q695T7 634 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 RIBC1Q8N443 379 aaPredicted RBP23.55■■□□□ 1.36
TSEN54-209ENST00000583454 AFAP1L2Q8N4X5 818 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 TEX9Q8N6V9 391 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 EFCAB3Q8N7B9 438 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 OR2Y1Q8NGV0 311 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 CREB3L4Q8TEY5 395 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 SEC16BQ96JE7 1060 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 GPR83Q9NYM4 423 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 LUZP4Q9P127 313 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 DCDC2Q9UHG0 476 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 ZNF490Q9ULM2 529 aaPredicted RBP23.55■■□□□ 1.36
TSEN54-209ENST00000583454 CRYBG3Q68DQ2 2970 aa23.55■■□□□ 1.36
TSEN54-209ENST00000583454 IGLV3-12A0A075B6K2 115 aa23.54■■□□□ 1.36
TSEN54-209ENST00000583454 A0A0A6YYC8 382 aaPredicted RBP23.54■■□□□ 1.36
TSEN54-209ENST00000583454 VSTM2BA6NLU5 285 aa23.54■■□□□ 1.36
TSEN54-209ENST00000583454 I3L1I5 382 aaPredicted RBP23.54■■□□□ 1.36
TSEN54-209ENST00000583454 PRPF4O43172 522 aaKnown RBP eCLIP23.54■■□□□ 1.36
TSEN54-209ENST00000583454 VPS4BO75351 444 aa23.54■■□□□ 1.36
TSEN54-209ENST00000583454 SIX3O95343 332 aaPredicted RBP23.54■■□□□ 1.36
TSEN54-209ENST00000583454 NSA2O95478 260 aaKnown RBP23.54■■□□□ 1.36
TSEN54-209ENST00000583454 FBLP22087 321 aaKnown RBP23.54■■□□□ 1.36
TSEN54-209ENST00000583454 GSTM2P28161 218 aa23.54■■□□□ 1.36
TSEN54-209ENST00000583454 OTX2P32243 289 aa23.54■■□□□ 1.36
TSEN54-209ENST00000583454 RRADP55042 308 aa23.54■■□□□ 1.36
TSEN54-209ENST00000583454 RGS1Q08116 209 aa23.54■■□□□ 1.36
TSEN54-209ENST00000583454 LAPTM5Q13571 262 aa23.54■■□□□ 1.36
TSEN54-209ENST00000583454 INPP5JQ15735 1006 aaPredicted RBP23.54■■□□□ 1.36
TSEN54-209ENST00000583454 RAB43Q86YS6 212 aa23.54■■□□□ 1.36
TSEN54-209ENST00000583454 AMER3Q8N944 861 aa23.54■■□□□ 1.36
TSEN54-209ENST00000583454 TTLQ8NG68 377 aa23.54■■□□□ 1.36
TSEN54-209ENST00000583454 PHF21BQ96EK2 531 aa23.54■■□□□ 1.36
TSEN54-209ENST00000583454 TMEM109Q9BVC6 243 aa23.54■■□□□ 1.36
TSEN54-209ENST00000583454 SLC6A16Q9GZN6 736 aa23.54■■□□□ 1.36
TSEN54-209ENST00000583454 RHBGQ9H310 441 aa23.54■■□□□ 1.36
TSEN54-209ENST00000583454 CTSFQ9UBX1 484 aa23.54■■□□□ 1.36
TSEN54-209ENST00000583454 VPS4AQ9UN37 437 aa23.54■■□□□ 1.36
TSEN54-209ENST00000583454 PTRH2Q9Y3E5 179 aaKnown RBP23.54■■□□□ 1.36
TSEN54-209ENST00000583454 NOTCH2Q04721 2471 aa23.53■■□□□ 1.36
TSEN54-209ENST00000583454 TLDC2A0PJX2 215 aa23.53■■□□□ 1.36
TSEN54-209ENST00000583454 H0YIG0 161 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms