RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 TBC1D31Q96DN5 1066 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 SPDL1Q96EA4 605 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 SNF8Q96H20 258 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 CDHR1Q96JP9 859 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 PCDHB18PQ96TA0 734 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 SH3GL3Q99963 347 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 TIPINQ9BVW5 301 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 PITPNM3Q9BZ71 974 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 LRMDAQ9H2I8 198 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 RANBP17Q9H2T7 1088 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 CDC42EP4Q9H3Q1 356 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 SMARCAD1Q9H4L7 1026 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 TMEM206Q9H813 350 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 DCLRE1BQ9H816 532 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 RNPEPL1Q9HAU8 725 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 PARVGQ9HBI0 331 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 UBE2TQ9NPD8 197 aaPredicted RBP3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 AGPAT3Q9NRZ7 376 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 SENP1Q9P0U3 644 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 FETUBQ9UGM5 382 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 ANAPC5Q9UJX4 755 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 NOCTQ9UK39 431 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 GTF3C4Q9UKN8 822 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 USH1CQ9Y6N9 552 aa3.75□□□□□ -1.81
SMCHD1-208ENST00000583344 ADGRA3Q8IWK6 1321 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 FAM47DPA6NHR8 397 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 KRTAP16-1A8MUX0 517 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ANKRD63C9JTQ0 380 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 F5H6K3 240 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 VCYO14598 125 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ALOX15BO15296 676 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 SYNGR3O43761 229 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 EDF1O60869 148 aaKnown RBP3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 CTSVO60911 334 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 PEX11AO75192 247 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ERAL1O75616 437 aaKnown RBP3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 LYPLA2O95372 231 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 TGDSO95455 350 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 BAG2O95816 211 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 GAS8O95995 478 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 IL1BP01584 269 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 LINGO3P0C6S8 592 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 PRSS56P0CW18 603 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 TPBGLP0DKB5 382 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 MYBL1P10243 752 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ERVK-10P10266 1014 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 IRF1P10914 325 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 EEF2P13639 858 aaKnown RBP3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 KRT13P13646 458 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ATP6V1C1P21283 382 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 PTPN4P29074 926 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 NMT1P30419 496 aaKnown RBP3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ALDH3A1P30838 453 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 FOXN2P32314 431 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 GTF2H1P32780 548 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ACSL1P33121 698 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 PPARGP37231 505 aaPredicted RBP3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 RGS2P41220 211 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 KCNJ1P48048 391 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 GPC3P51654 580 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 VAMP7P51809 220 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 PRELPP51888 382 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 CCNHP51946 323 aaPredicted RBP3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 MFAP3P55082 362 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 FKBP1AP62942 108 aaKnown RBP3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 GTF2BQ00403 316 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 MYL7Q01449 175 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 CDR2Q01850 454 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 SCARB2Q14108 478 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 MESDQ14696 234 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 PDK4Q16654 411 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 KYNUQ16719 465 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 DUSP28Q4G0W2 176 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ZC2HC1CQ53FD0 456 aaPredicted RBP3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ANKRD20A2Q5SQ80 823 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ANKRD20A1Q5TYW2 823 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ANKRD20A3Q5VUR7 823 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 FRG2Q64ET8 278 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 FAM91A1Q658Y4 838 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 PPP1R2P3Q6NXS1 205 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 RPUSD3Q6P087 351 aaKnown RBP3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 INO80CQ6PI98 192 aaPredicted RBP3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 CYP20A1Q6UW02 462 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 NIPA1Q7RTP0 329 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 SLC46A3Q7Z3Q1 461 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 DNAJB7Q7Z6W7 309 aaPredicted RBP3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 TRPT1Q86TN4 253 aaKnown RBP3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 NRAPQ86VF7 1730 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ERICH1Q86X53 443 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ZNF677Q86XU0 584 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ECHDC2Q86YB7 292 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 DYDC1Q8WWB3 177 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 KIFAP3Q92845 792 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 KLHL15Q96M94 604 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 CFAP57Q96MR6 1250 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ACCSQ96QU6 501 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 TGS1Q96RS0 853 aaKnown RBP3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ATOH8Q96SQ7 321 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 IWS1Q96ST2 819 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 RIT2Q99578 217 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms