RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 FBXO8Q9NRD0 319 aa9.08□□□□□ -0.96
RFFL-210ENST00000582308 VPS29Q9UBQ0 182 aa9.08□□□□□ -0.96
RFFL-210ENST00000582308 GIMAP2Q9UG22 337 aa9.08□□□□□ -0.96
RFFL-210ENST00000582308 DCTN4Q9UJW0 460 aa9.08□□□□□ -0.96
RFFL-210ENST00000582308 SERTAD3Q9UJW9 196 aa9.08□□□□□ -0.96
RFFL-210ENST00000582308 SLC12A4Q9UP95 1085 aa9.08□□□□□ -0.96
RFFL-210ENST00000582308 RUVBL1Q9Y265 456 aaKnown RBP9.08□□□□□ -0.96
RFFL-210ENST00000582308 MRPS2Q9Y399 296 aaKnown RBP9.08□□□□□ -0.96
RFFL-210ENST00000582308 NUP214P35658 2090 aaPredicted RBP9.08□□□□□ -0.96
RFFL-210ENST00000582308 CCDC187A0A096LP49 1063 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 A0A0G2JN53 185 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 GOLGA8QA0A0J9YX86 632 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 HYKKA2RU49 373 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 GOLGA8OA6NCC3 632 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 TRPC5OSA6NMA1 111 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 SRRM3A6NNA2 597 aaPredicted RBP9.07□□□□□ -0.96
RFFL-210ENST00000582308 B4E171 279 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 NPIPB8E9PQR5 432 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 GOLGA8NF8WBI6 632 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 TXNDC9O14530 226 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 LSM1O15116 133 aaKnown RBP9.07□□□□□ -0.96
RFFL-210ENST00000582308 ZSCAN9O15535 394 aaPredicted RBP9.07□□□□□ -0.96
RFFL-210ENST00000582308 RGS14O43566 566 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 DIAPH2O60879 1101 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 TIAF1O95411 115 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 B3GALT4O96024 378 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 SLC35G6P0C7Q6 338 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 ZNF888P0CJ79 500 aaPredicted RBP9.07□□□□□ -0.96
RFFL-210ENST00000582308 TROVE2P10155 538 aaKnown RBP eCLIP9.07□□□□□ -0.96
RFFL-210ENST00000582308 FGF5P12034 268 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 ITIH1P19827 911 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 EPHA3P29320 983 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 TSPAN7P41732 249 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 GCGRP47871 477 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 AQP5P55064 265 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 STXBP1P61764 594 aaKnown RBP9.07□□□□□ -0.96
RFFL-210ENST00000582308 CUL3Q13618 768 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 IL11RAQ14626 422 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 NR6A1Q15406 480 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 IMPG1Q17R60 797 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 TMEM35AQ53FP2 167 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 SPDYAQ5MJ70 313 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 CHSY3Q70JA7 882 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 LARP4Q71RC2 724 aaKnown RBP eCLIP9.07□□□□□ -0.96
RFFL-210ENST00000582308 DTWD1Q8N5C7 304 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 ZNF655Q8N720 491 aaPredicted RBP9.07□□□□□ -0.96
RFFL-210ENST00000582308 OR2L5Q8NG80 312 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 OR8K5Q8NH50 307 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 UTP15Q8TED0 518 aaKnown RBP9.07□□□□□ -0.96
RFFL-210ENST00000582308 CHTF18Q8WVB6 975 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 PMEPA1Q969W9 287 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 RGMAQ96B86 450 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 TUBGCP3Q96CW5 907 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 APIPQ96GX9 242 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 MAELQ96JY0 434 aaKnown RBP9.07□□□□□ -0.96
RFFL-210ENST00000582308 C10orf90Q96M02 699 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 OR52B2Q96RD2 323 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 CCT8L2Q96SF2 557 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 CTRCQ99895 268 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 ELAC2Q9BQ52 826 aaKnown RBP9.07□□□□□ -0.96
RFFL-210ENST00000582308 EBF4Q9BQW3 602 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 SORBS1Q9BX66 1292 aaKnown RBP9.07□□□□□ -0.96
RFFL-210ENST00000582308 ZNF717Q9BY31 904 aaPredicted RBP9.07□□□□□ -0.96
RFFL-210ENST00000582308 MRPL1Q9BYD6 325 aaKnown RBP9.07□□□□□ -0.96
RFFL-210ENST00000582308 NLNQ9BYT8 704 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 REXO4Q9GZR2 422 aaKnown RBP9.07□□□□□ -0.96
RFFL-210ENST00000582308 AKTIPQ9H8T0 292 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 FANCEQ9HB96 536 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 PRM3Q9NNZ6 103 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 LHX9Q9NQ69 397 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 PFDN4Q9NQP4 134 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 PRDM7Q9NQW5 492 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 SLC39A1Q9NY26 324 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 RARRES3Q9UL19 164 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 LOXL2Q9Y4K0 774 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 AHCTF1Q8WYP5 2266 aa9.07□□□□□ -0.96
RFFL-210ENST00000582308 A0A0G2JND7 137 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 RTCAO00442 366 aaKnown RBP9.06□□□□□ -0.96
RFFL-210ENST00000582308 PLPP1O14494 284 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 POLR1CO15160 346 aaPredicted RBP9.06□□□□□ -0.96
RFFL-210ENST00000582308 ZNF749O43361 778 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 ERI3O43414 337 aaKnown RBP9.06□□□□□ -0.96
RFFL-210ENST00000582308 PEX11AO75192 247 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 SEC22BO75396 215 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 RSL1D1O76021 490 aaKnown RBP9.06□□□□□ -0.96
RFFL-210ENST00000582308 KLHL18O94889 574 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 SEMA3DO95025 777 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 PRR35P0CG20 571 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 PRPH2P23942 346 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 BSGP35613 385 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 PLA2G16P53816 162 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 EMP3P54852 163 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 RAB8AP61006 207 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 RAE1P78406 368 aaKnown RBP9.06□□□□□ -0.96
RFFL-210ENST00000582308 GRM7Q14831 915 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 KIAA0040Q15053 153 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 AP5B1Q2VPB7 878 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 GALNTL6Q49A17 601 aa9.06□□□□□ -0.96
RFFL-210ENST00000582308 RFTN2Q52LD8 501 aaPredicted RBP9.06□□□□□ -0.96
RFFL-210ENST00000582308 C6orf136Q5SQH8 315 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms