RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 LOXL2Q9Y4K0 774 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 PCDHB3Q9Y5E6 796 aa10.96□□□□□ -0.65
GGA3-211ENST00000582232 A0A1W2PNU3 283 aaPredicted RBP10.95□□□□□ -0.66
GGA3-211ENST00000582232 SDHDO14521 159 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 PLD2O14939 933 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 LSM1O15116 133 aaKnown RBP10.95□□□□□ -0.66
GGA3-211ENST00000582232 POLR1CO15160 346 aaPredicted RBP10.95□□□□□ -0.66
GGA3-211ENST00000582232 SKAP2O75563 359 aaPredicted RBP10.95□□□□□ -0.66
GGA3-211ENST00000582232 SCELO95171 688 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 EIF2S1P05198 315 aaKnown RBP10.95□□□□□ -0.66
GGA3-211ENST00000582232 SERPIND1P05546 499 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 LINC00032P0C843 101 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 PRR35P0CG20 571 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 TROVE2P10155 538 aaKnown RBP eCLIP10.95□□□□□ -0.66
GGA3-211ENST00000582232 CCL4P13236 92 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 DRD4P21917 467 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 SEC24CP53992 1094 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 ARSFP54793 590 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 FOXM1Q08050 763 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 TGM3Q08188 693 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 TBL3Q12788 808 aaKnown RBP10.95□□□□□ -0.66
GGA3-211ENST00000582232 TARDBPQ13148 414 aaKnown RBP eCLIP10.95□□□□□ -0.66
GGA3-211ENST00000582232 KIAA0040Q15053 153 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 PDCD2Q16342 344 aaPredicted RBP10.95□□□□□ -0.66
GGA3-211ENST00000582232 NDUFA9Q16795 377 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 CGB2Q6NT52 195 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 NIPAL1Q6NVV3 410 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 ABHD17CQ6PCB6 329 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 SCIMPQ6UWF3 145 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 CEACAM20Q6UY09 585 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 PPP1R3BQ86XI6 285 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 DDIASQ8IXT1 998 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 METTL4Q8N3J2 472 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 TTC29Q8NA56 475 aaPredicted RBP10.95□□□□□ -0.66
GGA3-211ENST00000582232 KCT2Q8NC54 265 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 OR2T11Q8NH01 316 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 ACTRT2Q8TDY3 377 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 UTP15Q8TED0 518 aaKnown RBP10.95□□□□□ -0.66
GGA3-211ENST00000582232 CHTF18Q8WVB6 975 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 GAL3ST3Q96A11 431 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 RGMAQ96B86 450 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 MVB12AQ96EY5 273 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 FCRL1Q96LA6 429 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 C3orf30Q96M34 536 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 TEFMQ96QE5 360 aaKnown RBP10.95□□□□□ -0.66
GGA3-211ENST00000582232 F2RL3Q96RI0 385 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 HBEGFQ99075 208 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 MACROD1Q9BQ69 325 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 CENPKQ9BS16 269 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 TBCDQ9BTW9 1192 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 DDA1Q9BW61 102 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 ZNF717Q9BY31 904 aaPredicted RBP10.95□□□□□ -0.66
GGA3-211ENST00000582232 NUF2Q9BZD4 464 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 NSRP1Q9H0G5 558 aaKnown RBP10.95□□□□□ -0.66
GGA3-211ENST00000582232 OR51B5Q9H339 312 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 KLHL31Q9H511 634 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 KCNK13Q9HB14 408 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 RIC8BQ9NVN3 520 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 AHSPQ9NZD4 102 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 ADAM29Q9UKF5 820 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 SLC12A4Q9UP95 1085 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 PCDHGA8Q9Y5G5 932 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 PCDHGA3Q9Y5H0 932 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 PTGDR2Q9Y5Y4 395 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 WDFY3Q8IZQ1 3526 aa10.95□□□□□ -0.66
GGA3-211ENST00000582232 HYKKA2RU49 373 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 PLPP1O14494 284 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 HYAL3O43820 417 aaPredicted RBP10.94□□□□□ -0.66
GGA3-211ENST00000582232 HBQ1P09105 142 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 ACPPP15309 386 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 ALOX12P18054 663 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 BSGP35613 385 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 AQP5P55064 265 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 HMGCS1Q01581 520 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 HERC3Q15034 1050 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 IMPG1Q17R60 797 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 MUM1Q2TAK8 710 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 SPIN4Q56A73 249 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 TOR1AIP1Q5JTV8 583 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 GALNT18Q6P9A2 607 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 TRIM40Q6P9F5 258 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 IGF2-ASQ6U949 168 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 LARP4Q71RC2 724 aaKnown RBP eCLIP10.94□□□□□ -0.66
GGA3-211ENST00000582232 ABHD13Q7L211 337 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 UBE3DQ7Z6J8 389 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 ZFAND4Q86XD8 727 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 PPP3R2Q96LZ3 170 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 C10orf90Q96M02 699 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 QRFPRQ96P65 431 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 KCNC2Q96PR1 638 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 TAAR9Q96RI9 348 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 ASPSCR1Q9BZE9 553 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 ROGDIQ9GZN7 287 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 DDX31Q9H8H2 851 aaKnown RBP10.94□□□□□ -0.66
GGA3-211ENST00000582232 AKTIPQ9H8T0 292 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 CLK4Q9HAZ1 481 aaKnown RBP10.94□□□□□ -0.66
GGA3-211ENST00000582232 APMAPQ9HDC9 416 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 NPHS2Q9NP85 383 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 LHX9Q9NQ69 397 aa10.94□□□□□ -0.66
GGA3-211ENST00000582232 PRDM7Q9NQW5 492 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms