RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 NLGN4XQ8N0W4 816 aa14.35□□□□□ -0.11
MKS1-210ENST00000581180 ESX1Q8N693 406 aa14.35□□□□□ -0.11
MKS1-210ENST00000581180 NLGN4YQ8NFZ3 816 aaPredicted RBP14.35□□□□□ -0.11
MKS1-210ENST00000581180 PPP1R14CQ8TAE6 165 aa14.35□□□□□ -0.11
MKS1-210ENST00000581180 ZCCHC10Q8TBK6 192 aa14.35□□□□□ -0.11
MKS1-210ENST00000581180 METTL6Q8TCB7 284 aa14.35□□□□□ -0.11
MKS1-210ENST00000581180 CCT6BQ92526 530 aa14.35□□□□□ -0.11
MKS1-210ENST00000581180 NKD1Q969G9 470 aa14.35□□□□□ -0.11
MKS1-210ENST00000581180 MS4A6EQ96DS6 147 aa14.35□□□□□ -0.11
MKS1-210ENST00000581180 MVB12AQ96EY5 273 aa14.35□□□□□ -0.11
MKS1-210ENST00000581180 MTERF1Q99551 399 aaKnown RBP14.35□□□□□ -0.11
MKS1-210ENST00000581180 SHCBP1LQ9BZQ2 653 aa14.35□□□□□ -0.11
MKS1-210ENST00000581180 SLC7A5P2Q9GIP4 190 aa14.35□□□□□ -0.11
MKS1-210ENST00000581180 C20orf27Q9GZN8 174 aa14.35□□□□□ -0.11
MKS1-210ENST00000581180 LHX9Q9NQ69 397 aa14.35□□□□□ -0.11
MKS1-210ENST00000581180 SLC22A11Q9NSA0 550 aa14.35□□□□□ -0.11
MKS1-210ENST00000581180 FARSBQ9NSD9 589 aaKnown RBP14.35□□□□□ -0.11
MKS1-210ENST00000581180 SNX6Q9UNH7 406 aa14.35□□□□□ -0.11
MKS1-210ENST00000581180 TIMM22Q9Y584 194 aa14.35□□□□□ -0.11
MKS1-210ENST00000581180 CROCCQ5TZA2 2017 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 NUP210LQ5VU65 1888 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 URADA6NGE7 173 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 MANBAO00462 879 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 ETHE1O95571 254 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 TGFB1P01137 390 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 PDYNP01213 254 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 KLK3P07288 261 aaPredicted RBP14.34□□□□□ -0.11
MKS1-210ENST00000581180 FGF4P08620 206 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 ZNF888P0CJ79 500 aaPredicted RBP14.34□□□□□ -0.11
MKS1-210ENST00000581180 ALOX12P18054 663 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 ALAS2P22557 587 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 GRK2P25098 689 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 HMOX2P30519 316 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 HTR6P50406 440 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 ATP1A2P50993 1020 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 PCBP4P57723 403 aaKnown RBP14.34□□□□□ -0.11
MKS1-210ENST00000581180 ABCE1P61221 599 aaKnown RBP14.34□□□□□ -0.11
MKS1-210ENST00000581180 STXBP1P61764 594 aaKnown RBP14.34□□□□□ -0.11
MKS1-210ENST00000581180 RPS13P62277 151 aaKnown RBP14.34□□□□□ -0.11
MKS1-210ENST00000581180 FOXK2Q01167 660 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 BST1Q10588 318 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 IFT88Q13099 833 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 DDX39BQ13838 428 aaKnown RBP14.34□□□□□ -0.11
MKS1-210ENST00000581180 HSP90B2PQ58FF3 399 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 DEPDC1Q5TB30 811 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 C1orf189Q5VU69 101 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 TTC19Q6DKK2 380 aaPredicted RBP14.34□□□□□ -0.11
MKS1-210ENST00000581180 PRMT9Q6P2P2 845 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 PRSS41Q7RTY9 318 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 UBE3DQ7Z6J8 389 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 PDSS2Q86YH6 399 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 RAB3IL1Q8TBN0 382 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.34□□□□□ -0.11
MKS1-210ENST00000581180 SELENOMQ8WWX9 145 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 GAL3ST3Q96A11 431 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 MTFMTQ96DP5 389 aaKnown RBP14.34□□□□□ -0.11
MKS1-210ENST00000581180 CMTM7Q96FZ5 175 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 F2RL3Q96RI0 385 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 SORT1Q99523 831 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 DPH2Q9BQC3 489 aaPredicted RBP14.34□□□□□ -0.11
MKS1-210ENST00000581180 ELOVL6Q9H5J4 265 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 ZNF395Q9H8N7 513 aaPredicted RBP14.34□□□□□ -0.11
MKS1-210ENST00000581180 EML4Q9HC35 981 aaKnown RBP14.34□□□□□ -0.11
MKS1-210ENST00000581180 PADI1Q9ULC6 663 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 ACACBO00763 2458 aa14.34□□□□□ -0.11
MKS1-210ENST00000581180 A0A0A6YYC8 382 aaPredicted RBP14.33□□□□□ -0.12
MKS1-210ENST00000581180 SERTM1A2A2V5 107 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 I3L1I5 382 aaPredicted RBP14.33□□□□□ -0.12
MKS1-210ENST00000581180 TERTO14746 1132 aaKnown RBP14.33□□□□□ -0.12
MKS1-210ENST00000581180 AZIN1O14977 448 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 SNNO75324 88 aaPredicted RBP14.33□□□□□ -0.12
MKS1-210ENST00000581180 LYPLA1O75608 230 aaPredicted RBP14.33□□□□□ -0.12
MKS1-210ENST00000581180 NSA2O95478 260 aaKnown RBP14.33□□□□□ -0.12
MKS1-210ENST00000581180 KRT6AP02538 564 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 KRT6BP04259 564 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 UROSP10746 265 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 NEFHP12036 1026 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 IL1RNP18510 177 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 OR1D4P47884 311 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 SLC1A6P48664 564 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 KRT6CP48668 564 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 PHEXP78562 749 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 DCDP81605 110 aaKnown RBP14.33□□□□□ -0.12
MKS1-210ENST00000581180 ZNF33BQ06732 778 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 ABHD18Q0P651 414 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 STX3Q13277 289 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 CLN3Q13286 438 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 CUL3Q13618 768 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 HERC3Q15034 1050 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 TGIF1Q15583 401 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 NKAIN1Q4KMZ8 207 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 KHDRBS2Q5VWX1 349 aaKnown RBP14.33□□□□□ -0.12
MKS1-210ENST00000581180 ABHD17CQ6PCB6 329 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 FAM199XQ6PEV8 388 aaPredicted RBP14.33□□□□□ -0.12
MKS1-210ENST00000581180 FAM198BQ6UWH4 519 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 COX15Q7KZN9 410 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 ABHD13Q7L211 337 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 CACNA2D3Q8IZS8 1091 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 OR2L5Q8NG80 312 aa14.33□□□□□ -0.12
MKS1-210ENST00000581180 OR9A4Q8NGU2 314 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms