RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 LINC00854A0A1B0GVQ3 168 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 URADA6NGE7 173 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 ENO4A6NNW6 628 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 FAM25EA8MYX2 175 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 NR5A2O00482 541 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 RIPK2O43353 540 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 BBOX1O75936 387 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 AP2A2O94973 939 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 RAF1P04049 648 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 FAM157CP0CG43 387 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 SFTPCP11686 197 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 CYP11B2P19099 503 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 HLA-DPA1P20036 260 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 AZGP1P25311 298 aaKnown RBP3.92□□□□□ -1.78
NF1-220ENST00000581113 CCR10P46092 362 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 RAB28P51157 221 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 ZNF41P51814 821 aaPredicted RBP3.92□□□□□ -1.78
NF1-220ENST00000581113 TKTL1P51854 596 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 RAD23AP54725 363 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 MAZP56270 477 aaKnown RBP3.92□□□□□ -1.78
NF1-220ENST00000581113 HERV-K104P61576 105 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 SNRPD1P62314 119 aaKnown RBP3.92□□□□□ -1.78
NF1-220ENST00000581113 TAF10Q12962 218 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 CAMK2DQ13557 499 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 UGT3A2Q3SY77 523 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 KRT80Q6KB66 452 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 PRR27Q6MZM9 219 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 TRAT1Q6PIZ9 186 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 GLRX5Q86SX6 157 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 TDRD5Q8NAT2 981 aaKnown RBP3.92□□□□□ -1.78
NF1-220ENST00000581113 OR6J1Q8NGC5 347 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 OR52N5Q8NH56 324 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 BRSK1Q8TDC3 778 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 HCAR2Q8TDS4 363 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 ANP32BQ92688 251 aaKnown RBP3.92□□□□□ -1.78
NF1-220ENST00000581113 HDAC11Q96DB2 347 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 ARSGQ96EG1 525 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 FAM20AQ96MK3 541 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 OR2B2Q9GZK3 357 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 TNMDQ9H2S6 317 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 FAM207AQ9NSI2 230 aaPredicted RBP3.92□□□□□ -1.78
NF1-220ENST00000581113 TMOD3Q9NYL9 352 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 CTNNA3Q9UI47 895 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 STUB1Q9UNE7 303 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 EXOC7Q9UPT5 735 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 TNNQ9UQP3 1299 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 ITM2BQ9Y287 266 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 PYGO1Q9Y3Y4 419 aa3.92□□□□□ -1.78
NF1-220ENST00000581113 LY75O60449 1722 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 KIF7Q2M1P5 1343 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 A0A087WW49 117 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 A4D1N5 150 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 KLF11O14901 512 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 PRPSAP2O60256 369 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 SEC22BO75396 215 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 DFFBO76075 338 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 C22orf31O95567 290 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 ACSL3O95573 720 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 QDPRP09417 244 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 ZNF26P17031 533 aaPredicted RBP3.91□□□□□ -1.78
NF1-220ENST00000581113 PTGER4P35408 488 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 ANP32AP39687 249 aaKnown RBP3.91□□□□□ -1.78
NF1-220ENST00000581113 CD151P48509 253 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 LHX1P48742 406 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 SLC26A5P58743 744 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 HNRNPDQ14103 355 aaKnown RBP3.91□□□□□ -1.78
NF1-220ENST00000581113 VEZF1Q14119 521 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 TMEM187Q14656 261 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 ZFP69Q49AA0 526 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 MCMDC2Q4G0Z9 681 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 XKR3Q5GH77 459 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 SLC25A53Q5H9E4 307 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 CCDC183Q5T5S1 534 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 CST9LP1Q5W188 147 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 ZNF530Q6P9A1 599 aaPredicted RBP3.91□□□□□ -1.78
NF1-220ENST00000581113 BHLHB9Q6PI77 547 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 OLFM4Q6UX06 510 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 RBPMS2Q6ZRY4 209 aaKnown RBP3.91□□□□□ -1.78
NF1-220ENST00000581113 LPCAT2Q7L5N7 544 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 MMD2Q8IY49 270 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 CCAR2Q8N163 923 aaKnown RBP3.91□□□□□ -1.78
NF1-220ENST00000581113 XXYLT1Q8NBI6 393 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 GRK7Q8WTQ7 553 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 MRPS27Q92552 414 aaKnown RBP3.91□□□□□ -1.78
NF1-220ENST00000581113 RMDN1Q96DB5 314 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 SIPA1Q96FS4 1042 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 VPS39Q96JC1 886 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 ART5Q96L15 291 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 CPNE1Q99829 537 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 THUMPD3Q9BV44 507 aaKnown RBP3.91□□□□□ -1.78
NF1-220ENST00000581113 DNAI2Q9GZS0 605 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 RPAP3Q9H6T3 665 aaPredicted RBP3.91□□□□□ -1.78
NF1-220ENST00000581113 COPS7BQ9H9Q2 264 aaPredicted RBP3.91□□□□□ -1.78
NF1-220ENST00000581113 FGF22Q9HCT0 170 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 CACNG5Q9UF02 275 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 FETUBQ9UGM5 382 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 ANAPC5Q9UJX4 755 aa3.91□□□□□ -1.78
NF1-220ENST00000581113 PKD1L3Q7Z443 1732 aa3.9□□□□□ -1.78
NF1-220ENST00000581113 ANKRD26Q9UPS8 1709 aa3.9□□□□□ -1.78
NF1-220ENST00000581113 MEIOCA2RUB1 952 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms