RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 HPDP32754 393 aaPredicted RBP9.41□□□□□ -0.9
GGA3-209ENST00000580646 BCL6P41182 706 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 ETV4P43268 484 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 VSX2P58304 361 aaPredicted RBP9.41□□□□□ -0.9
GGA3-209ENST00000580646 RPS18P62269 152 aaKnown RBP9.41□□□□□ -0.9
GGA3-209ENST00000580646 FAM53BQ14153 422 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 DOC2AQ14183 400 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 SLBPQ14493 270 aaKnown RBP eCLIP9.41□□□□□ -0.9
GGA3-209ENST00000580646 PCLAFQ15004 111 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 HIST2H2ACQ16777 129 aaPredicted RBP9.41□□□□□ -0.9
GGA3-209ENST00000580646 MUM1Q2TAK8 710 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 C11orf91Q3C1V1 193 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 FBXO48Q5FWF7 155 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 XKR6Q5GH73 641 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 WASHC2DQ5SRD0 308 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 PRAMEF9Q5VWM5 478 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 LIPMQ5VYY2 423 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 ZNF385CQ66K41 422 aaPredicted RBP9.41□□□□□ -0.9
GGA3-209ENST00000580646 HIST2H2AA3Q6FI13 130 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 PRICKLE2Q7Z3G6 844 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 VN1R4Q7Z5H5 301 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 ASPGQ86U10 573 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 DSELQ8IZU8 1212 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 OR4N4Q8N0Y3 316 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 CSNK1A1LQ8N752 337 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 NT5CQ8TCD5 201 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 ZBTB9Q96C00 473 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 CLIP3Q96DZ5 547 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 ABHD17AQ96GS6 310 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 TMEM237Q96Q45 408 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 SH3GL2Q99962 352 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 C17orf62Q9BQA9 187 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 NDC1Q9BTX1 674 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 SPRTNQ9H040 489 aaPredicted RBP9.41□□□□□ -0.9
GGA3-209ENST00000580646 SPNS1Q9H2V7 528 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 RHBGQ9H310 441 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 CENPHQ9H3R5 247 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 ACTL8Q9H568 366 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 IPPKQ9H8X2 491 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 SYNPO2LQ9H987 977 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 ZBTB26Q9HCK0 441 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 PPT2Q9UMR5 302 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 KCNMB2Q9Y691 235 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 SCN3AQ9NY46 2000 aa9.41□□□□□ -0.9
GGA3-209ENST00000580646 A0A1B0GX78 115 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 FEZF1A0PJY2 475 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 HYKKA2RU49 373 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 URADA6NGE7 173 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 H0YHG0 523 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 OR7A17O14581 309 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 DSCR3O14972 297 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 SUV39H1O43463 412 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 OR1F1O43749 312 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 TRIM13O60858 407 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 SPAG7O75391 227 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 SUPT7LO94864 414 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 CLDN9O95484 217 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 MLYCDO95822 493 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 SERPINA6P08185 405 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 CD63P08962 238 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 RAB40ALP0C0E4 278 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 CREB1P16220 341 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 CD22P20273 847 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 VARSP26640 1264 aaKnown RBP9.4□□□□□ -0.9
GGA3-209ENST00000580646 SERPINB5P36952 375 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 CCNG1P51959 295 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 ARFIP1P53367 373 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 MEF2AQ02078 507 aaPredicted RBP9.4□□□□□ -0.9
GGA3-209ENST00000580646 CLCQ05315 142 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 ZNF33BQ06732 778 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 GALNT1Q10472 559 aaPredicted RBP9.4□□□□□ -0.9
GGA3-209ENST00000580646 TRAF3Q13114 568 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 NDUFA9Q16795 377 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 UGT8Q16880 541 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 UNC50Q53HI1 259 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 LCN10Q6JVE6 187 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 TMEM214Q6NUQ4 689 aaKnown RBP9.4□□□□□ -0.9
GGA3-209ENST00000580646 MED27Q6P2C8 311 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 PRMT9Q6P2P2 845 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 ATG14Q6ZNE5 492 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 SYVN1Q86TM6 617 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 PTRH1Q86Y79 214 aaKnown RBP9.4□□□□□ -0.9
GGA3-209ENST00000580646 PLD3Q8IV08 490 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 ANKRD53Q8N9V6 530 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 CCDC63Q8NA47 563 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 ZNF740Q8NDX6 193 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 ARMC2Q8NEN0 867 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 C9orf43Q8TAL5 461 aaPredicted RBP9.4□□□□□ -0.9
GGA3-209ENST00000580646 SLC13A3Q8WWT9 602 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 SREK1Q8WXA9 508 aaKnown RBP9.4□□□□□ -0.9
GGA3-209ENST00000580646 REPS1Q96D71 796 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 GBP5Q96PP8 586 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 FAM111AQ96PZ2 611 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 ZNF382Q96SR6 550 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 TRMOQ9BU70 441 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 SLC7A5P2Q9GIP4 190 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 SLC6A16Q9GZN6 736 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 ACBD3Q9H3P7 528 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 NOL11Q9H8H0 719 aaKnown RBP9.4□□□□□ -0.9
GGA3-209ENST00000580646 ACTR8Q9H981 624 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms