RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 PLPP5Q8NEB5 264 aa12.98□□□□□ -0.33
CSNK1D-213ENST00000580446 ISL2Q96A47 359 aa12.98□□□□□ -0.33
CSNK1D-213ENST00000580446 TRIM11Q96F44 468 aa12.98□□□□□ -0.33
CSNK1D-213ENST00000580446 IL1RL2Q9HB29 575 aa12.98□□□□□ -0.33
CSNK1D-213ENST00000580446 JKAMPQ9P055 326 aa12.98□□□□□ -0.33
CSNK1D-213ENST00000580446 CR1P17927 2039 aa12.98□□□□□ -0.33
CSNK1D-213ENST00000580446 C3orf70A6NLC5 250 aaPredicted RBP12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 CTIFO43310 598 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 C1orf105O95561 183 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 EPPINO95925 133 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 OR56A5P0C7T3 313 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 CPOXP36551 454 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 UBXN1Q04323 297 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 C6orf52Q5T4I8 152 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 ERICH6BQ5W0A0 696 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 ZNF425Q6IV72 752 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 GK5Q6ZS86 529 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 FAM47EQ6ZV65 393 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 PLEKHM3Q6ZWE6 761 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 VN1R4Q7Z5H5 301 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 CCDC50Q8IVM0 306 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 KCT2Q8NC54 265 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 PPFIBP2Q8ND30 876 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 TFB1MQ8WVM0 346 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 IGFBPL1Q8WX77 278 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 ASB15Q8WXK1 588 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 HAUS1Q96CS2 278 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 PTCHD1Q96NR3 888 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 WFIKKN1Q96NZ8 548 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 TRIB1Q96RU8 372 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 FAM173AQ9BQD7 235 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 SH2D2AQ9NP31 389 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 PIH1D1Q9NWS0 290 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 NAALAD2Q9Y3Q0 740 aa12.97□□□□□ -0.33
CSNK1D-213ENST00000580446 WWP2O00308 870 aa12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 CCDC172P0C7W6 258 aa12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 RPA3P35244 121 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 ADRA1AP35348 466 aa12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 PIGAP37287 484 aa12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 MPP1Q00013 466 aa12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 DEFA6Q01524 100 aa12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 RANBP10Q6VN20 620 aa12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 C12orf54Q6X4T0 127 aa12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 LACC1Q8IV20 430 aa12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 ARMC10Q8N2F6 343 aa12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 APCDD1LQ8NCL9 501 aa12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 FBXO15Q8NCQ5 510 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 MCOLN3Q8TDD5 553 aa12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 TMEM171Q8WVE6 324 aa12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 SYN2Q92777 582 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 RAD51AP1Q96B01 352 aa12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 ZC3HAV1LQ96H79 300 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 C1orf159Q96HA4 380 aa12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 KCNK17Q96T54 332 aa12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 ISCUQ9H1K1 167 aa12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 ZNF701Q9NV72 531 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-213ENST00000580446 C15orf38-AP3S2A0A0A6YYH1 394 aa12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 A0A0G2JK05 382 aa12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 LGALS16A8MUM7 142 aa12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 CDK2AP1O14519 115 aa12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 GPC4O75487 556 aa12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 MYO1DO94832 1006 aa12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 CCL3P10147 92 aa12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 CNR1P21554 472 aa12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 CTSSP25774 331 aa12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 PPP2R1BP30154 601 aa12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 CYLC1P35663 651 aaPredicted RBP12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 ACVR1BP36896 505 aa12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 PLOD1Q02809 727 aaPredicted RBP12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 CDKAL1Q5VV42 579 aa12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 TTC23LQ6PF05 361 aa12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 SPNS2Q8IVW8 549 aa12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 C9orf106Q8NAJ2 232 aa12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 HMGCLL1Q8TB92 370 aa12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 MAK16Q9BXY0 300 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 ANKHQ9HCJ1 492 aa12.95□□□□□ -0.34
CSNK1D-213ENST00000580446 ROS1P08922 2347 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 HCN1O60741 890 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 LRATO95237 230 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 TPM2P07951 284 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 FHP07954 510 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 EZRP15311 586 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 TIMP3P35625 211 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 CLCN2P51788 898 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 HYAL4Q2M3T9 481 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 FAM174BQ3ZCQ3 159 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 RNF187Q5TA31 235 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 ICE2Q659A1 982 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 DENND5AQ6IQ26 1287 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 TMEM214Q6NUQ4 689 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 PACS1Q6VY07 963 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 ZNF550Q7Z398 422 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 NCLNQ969V3 563 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 CDKN2AIPNLQ96HQ2 116 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 SCYL1Q96KG9 808 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 NECTIN3Q9NQS3 549 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 NLE1Q9NVX2 485 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 CAMK2AQ9UQM7 478 aa12.94□□□□□ -0.34
CSNK1D-213ENST00000580446 DSCAMO60469 2012 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 CCDC162PA2VCL2 907 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms