RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 E9PLN8 166 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 ZBTB14O43829 449 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 MAN1A2O60476 641 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 NADKO95544 446 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 CYC1P08574 325 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 ZNF24P17028 368 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 RPL22P35268 128 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 HSD17B3P37058 310 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 BCL6P41182 706 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 ITGA8P53708 1063 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 OR4D2P58180 307 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 RPS15AP62244 130 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 SNRPNP63162 240 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 RELAQ04206 551 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 DHX9Q08211 1270 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 GBX1Q14549 363 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 MORF4L2Q15014 288 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 ABRAXAS2Q15018 415 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 TESK1Q15569 626 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 TTLL9Q3SXZ7 439 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 SPNS3Q6ZMD2 512 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 PCGF5Q86SE9 256 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 SHISA5Q8N114 240 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 CYP4X1Q8N118 509 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 ARHGEF39Q8N4T4 335 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 ALKBH8Q96BT7 664 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 SCMH1Q96GD3 660 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 PEX11GQ96HA9 241 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 TCF12Q99081 682 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 SH3GL2Q99962 352 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 VKORC1Q9BQB6 163 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 CCDC68Q9H2F9 335 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 MMP25Q9NPA2 562 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 TMEM184CQ9NVA4 438 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 TACC2O95359 2948 aa11.87□□□□□ -0.51
CDK5RAP3-212ENST00000579175 H3BQF6 201 aa11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 TP73O15350 636 aa11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 CDC40O60508 579 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 RDH16O75452 317 aa11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 SLC25A12O75746 678 aa11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 TPOP07202 933 aa11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 HRH2P25021 359 aa11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 UAP1Q16222 522 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 CASC4Q6P4E1 433 aa11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 C4orf22Q6V702 233 aa11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 TRMT10CQ7L0Y3 403 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 RPS19BP1Q86WX3 136 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 RELL1Q8IUW5 271 aa11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 CPSF7Q8N684 471 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 CAMKVQ8NCB2 501 aa11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 PHF10Q8WUB8 498 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 TMEM125Q96AQ2 219 aa11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 ZIM3Q96PE6 472 aa11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 NPAS2Q99743 824 aa11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 ENKD1Q9H0I2 346 aa11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 SYBUQ9NX95 663 aa11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 VPS9D1Q9Y2B5 631 aa11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 NAALAD2Q9Y3Q0 740 aa11.86□□□□□ -0.51
CDK5RAP3-212ENST00000579175 CSMD2Q7Z408 3487 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 DCHS2Q6V1P9 2916 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 FEZF1A0PJY2 475 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 ZNF860A6NHJ4 632 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 TFECO14948 347 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 NUDT17P0C025 328 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 CD1EP15812 388 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 PAMP19021 973 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 ARNTP27540 789 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 PTGS2P35354 604 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 GRK3P35626 688 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 CYB561P49447 251 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 VPS41P49754 854 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 GPS1Q13098 491 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 USP10Q14694 798 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 TRIP13Q15645 432 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 TYSND1Q2T9J0 566 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 RNASEH2BQ5TBB1 312 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 UBE2R2Q712K3 238 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 VN1R4Q7Z5H5 301 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 CROCCP2Q86T23 111 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 TMEM200AQ86VY9 491 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 SIAH3Q8IW03 269 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 KCT2Q8NC54 265 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 UBLCP1Q8WVY7 318 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 SLC13A3Q8WWT9 602 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 THAP11Q96EK4 314 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 KIFC1Q9BW19 673 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 CCDC177Q9NQR7 707 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 EIF2B3Q9NR50 452 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 CELSR1Q9NYQ6 3014 aa11.85□□□□□ -0.51
CDK5RAP3-212ENST00000579175 KCNE1BA0A087WTH5 132 aa11.84□□□□□ -0.51
CDK5RAP3-212ENST00000579175 A0A1B0GTH9 108 aa11.84□□□□□ -0.51
CDK5RAP3-212ENST00000579175 NME2P1O60361 137 aa11.84□□□□□ -0.51
CDK5RAP3-212ENST00000579175 NEURL1O76050 574 aa11.84□□□□□ -0.51
CDK5RAP3-212ENST00000579175 SERPIND1P05546 499 aa11.84□□□□□ -0.51
CDK5RAP3-212ENST00000579175 MPC1LP0DKB6 136 aa11.84□□□□□ -0.51
CDK5RAP3-212ENST00000579175 OGNP20774 298 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-212ENST00000579175 NME2P22392 152 aa11.84□□□□□ -0.51
CDK5RAP3-212ENST00000579175 PTGER1P34995 402 aa11.84□□□□□ -0.51
CDK5RAP3-212ENST00000579175 RFC3P40938 356 aa11.84□□□□□ -0.51
CDK5RAP3-212ENST00000579175 ART1P52961 327 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms