RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329		A0A1W2PS29	197 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TRBC2	A0A5B9	178 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MAGEB16	A2A368	324 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	HMX2	A2RU54	273 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	GABRR3	A8MPY1	467 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329		A8MUI8	341 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MAGEB17	A8MXT2	336 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	KDM4E	B2RXH2	506 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PRSS44	E7EML9	344 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329		E7ESA3	106 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	HRK	O00198	91 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	EIF3F	O00303	357 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CYR61	O00622	381 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	NME2P1	O60361	137 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SLC19A2	O60779	497 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SYF2	O95926	243 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CLPS	P04118	112 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SP1	P08047	785 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SNRPB2	P08579	225 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ENO3	P13929	434 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZNF37A	P17032	561 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ALOX12	P18054	663 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PGAM1	P18669	254 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	NME2	P22392	152 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TRHR	P34981	398 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	HSD17B2	P37059	387 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	RFC3	P40938	356 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ELK3	P41970	407 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MLF1	P58340	268 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	RAB8A	P61006	207 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	RPS15A	P62244	130 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ARG2	P78540	354 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	E2F2	Q14209	437 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ABRAXAS2	Q15018	415 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	OR4D1	Q15615	310 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	OR1C1	Q15619	314 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	INA	Q16352	499 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	BTBD16	Q32M84	506 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ADPRM	Q3LIE5	342 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZNF766	Q5HY98	468 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	LCE2D	Q5TA82	110 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	RTL6	Q6ICC9	239 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CAPN13	Q6MZZ7	669 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PAPD4	Q6PIY7	484 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	FAM180A	Q6UWF9	173 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	GFRAL	Q6UXV0	394 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZNF793	Q6ZN11	406 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	BNC2	Q6ZN30	1099 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	GSTA5	Q7RTV2	222 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	GALNTL5	Q7Z4T8	443 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	STRA8	Q7Z7C7	330 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	GALNT7	Q86SF2	657 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MRGPRG	Q86SM5	289 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PPIL6	Q8IXY8	311 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CA13	Q8N1Q1	262 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	RNF175	Q8N4F7	328 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SPATA6L	Q8N4H0	392 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TRIM58	Q8NG06	486 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	M1AP	Q8TC57	530 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	THAP3	Q8WTV1	239 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SLC13A3	Q8WWT9	602 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TM9SF4	Q92544	642 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	UCN3	Q969E3	161 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ESAM	Q96AP7	390 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	FBXL8	Q96CD0	374 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CERS2	Q96G23	380 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PDLIM5	Q96HC4	596 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CAPZA3	Q96KX2	299 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	LURAP1	Q96LR2	239 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	GPR137	Q96N19	417 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TSNARE1	Q96NA8	513 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TTC1	Q99614	292 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TSSK1B	Q9BXA7	367 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZNF717	Q9BY31	904 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TSGA10	Q9BZW7	698 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ENKD1	Q9H0I2	346 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	EPS8L2	Q9H6S3	715 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PROK2	Q9HC23	129 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SEMA4B	Q9NPR2	832 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PRDM7	Q9NQW5	492 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	FAM114A2	Q9NRY5	505 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	AGPAT4	Q9NRZ5	378 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TRMT1	Q9NXH9	659 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	GRHL1	Q9NZI5	618 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZFAT	Q9P243	1243 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SH3BGRL2	Q9UJC5	107 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SNX12	Q9UMY4	172 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CDC14A	Q9UNH5	594 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CHMP2B	Q9UQN3	213 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SLC22A14	Q9Y267	594 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MTO1	Q9Y2Z2	717 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MEMO1	Q9Y316	297 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PCDHGB6	Q9Y5F9	930 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	KLF2	Q9Y5W3	355 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	LIPG	Q9Y5X9	500 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	INTS1	Q8N201	2190 aa	Known RBP	4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms