RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 FRG2Q64ET8 278 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 NEK5Q6P3R8 708 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 C22orf39Q6P5X5 142 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 Q6ZVL8 140 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 RTL10Q7L3V2 364 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 VTCN1Q7Z7D3 282 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 TMEM179BQ7Z7N9 219 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 EGFL6Q8IUX8 553 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 CROCCP3Q8IVE0 287 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 SVOPLQ8N434 492 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 ZNF366Q8N895 744 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 ZNF420Q8TAQ5 688 aaPredicted RBP5.17□□□□□ -1.58
VAPA-203ENST00000577539 ADAMTS18Q8TE60 1221 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 PYURFQ96I23 114 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 MAGED4Q96JG8 741 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 CAPNS2Q96L46 248 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 FRG2BQ96QU4 278 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 NTMT1Q9BV86 223 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 OSBPL10Q9BXB5 764 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 SLC29A3Q9BZD2 475 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 FOXQ1Q9C009 403 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 WDR12Q9GZL7 423 aaKnown RBP5.17□□□□□ -1.58
VAPA-203ENST00000577539 KCNH6Q9H252 994 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 RAD21L1Q9H4I0 556 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 ARMC7Q9H6L4 198 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 KAT8Q9H7Z6 458 aaKnown RBP5.17□□□□□ -1.58
VAPA-203ENST00000577539 GORASP2Q9H8Y8 452 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 PDP1Q9P0J1 537 aaPredicted RBP5.17□□□□□ -1.58
VAPA-203ENST00000577539 SLC25A13Q9UJS0 675 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 PNMA8BQ9ULN7 279 aaPredicted RBP5.17□□□□□ -1.58
VAPA-203ENST00000577539 ATP11BQ9Y2G3 1177 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 PIKFYVEQ9Y2I7 2098 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 GPR55Q9Y2T6 319 aaPredicted RBP5.17□□□□□ -1.58
VAPA-203ENST00000577539 CCL27Q9Y4X3 112 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 TRAV19A0A0A6YYK7 116 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 H0Y8X5 98 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 M0R3G1 203 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 C1QCP02747 245 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 CRHBPP24387 322 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 CCR3P51677 355 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 MYBPC3Q14896 1274 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 NR1D2Q14995 579 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 KIAA0040Q15053 153 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 NOXRED1Q6NXP6 359 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 USP51Q70EK9 711 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 GAREM2Q75VX8 874 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 TMEM150AQ86TG1 271 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 RBM23Q86U06 439 aaKnown RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 HIPK1Q86Z02 1210 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 CLECL1Q8IZS7 167 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 SPARTQ8N0X7 666 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 ZCCHC7Q8N3Z6 543 aaKnown RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 TMCO5AQ8N6Q1 288 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 CHDHQ8NE62 594 aaPredicted RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 FNDC8Q8TC99 324 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 SPPL2AQ8TCT8 520 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 RNF141Q8WVD5 230 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 RORBQ92753 470 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 BORCS5Q969J3 196 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 SCRN2Q96FV2 425 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 P2RY13Q9BPV8 354 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 MTG2Q9H4K7 406 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 DCAF13Q9NV06 445 aaKnown RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 SPG21Q9NZD8 308 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 COQ6Q9Y2Z9 468 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 TRIM17Q9Y577 477 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 GMPPBQ9Y5P6 360 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 PATJQ8NI35 1801 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 A0A096LPI6 279 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 MGAT4DA6NG13 374 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 CCL16O15467 120 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 DCKP27707 260 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 PREPP48147 710 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 MRPL19P49406 292 aaKnown RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 PLA2G16P53816 162 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 ABHD18Q0P651 414 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 RAPSNQ13702 412 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 CTU2Q2VPK5 515 aaKnown RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 RBM48Q5RL73 367 aaKnown RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 ATG9BQ674R7 924 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 CDPF1Q6NVV7 123 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 PIWIL3Q7Z3Z3 882 aaKnown RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 TMEM25Q86YD3 366 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 DCP2Q8IU60 420 aaKnown RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 FAM9CQ8IZT9 166 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 SHISA5Q8N114 240 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 ELMOD1Q8N336 334 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 NAXEQ8NCW5 288 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 SORCS1Q8WY21 1168 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 HDAC2Q92769 488 aaKnown RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 TMEM159Q96B96 161 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 YME1L1Q96TA2 773 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 BARD1Q99728 777 aaKnown RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 CPPED1Q9BRF8 314 aaPredicted RBP5.16□□□□□ -1.58
VAPA-203ENST00000577539 CRB3Q9BUF7 120 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 FAM83DQ9H4H8 585 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 TMEM45AQ9NWC5 275 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 SCN3BQ9NY72 215 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 PSME2Q9UL46 239 aa5.16□□□□□ -1.58
VAPA-203ENST00000577539 CBLCQ9ULV8 474 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms