RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 NXPE1Q8N323 547 aa8.61□□□□□ -1.03
CDH8-203ENST00000577390 C3orf58Q8NDZ4 430 aa8.61□□□□□ -1.03
CDH8-203ENST00000577390 RFKQ969G6 155 aa8.61□□□□□ -1.03
CDH8-203ENST00000577390 FAM173AQ9BQD7 235 aa8.61□□□□□ -1.03
CDH8-203ENST00000577390 CD93Q9NPY3 652 aa8.61□□□□□ -1.03
CDH8-203ENST00000577390 DNAJB11Q9UBS4 358 aa8.61□□□□□ -1.03
CDH8-203ENST00000577390 SEC14L4Q9UDX3 406 aa8.61□□□□□ -1.03
CDH8-203ENST00000577390 LTN1O94822 1766 aa8.61□□□□□ -1.03
CDH8-203ENST00000577390 IQCF5A8MTL0 148 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 RRP8O43159 456 aaKnown RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 ZNF254O75437 659 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 OR2B3O76000 313 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 LRIG2O94898 1065 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 RPS17P08708 135 aaKnown RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 T-ENOLP0DO92 83 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 MMP8P22894 467 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 MARCKSL1P49006 195 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 FAAP100Q0VG06 881 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 RFTN2Q52LD8 501 aaPredicted RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 CPTPQ5TA50 214 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 ANKS1BQ7Z6G8 1248 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 COQ3Q9NZJ6 369 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 KLHL42Q9P2K6 505 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 TIMM22Q9Y584 194 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 LTA4HP09960 611 aaKnown RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 ARG2P78540 354 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 TLE3Q04726 772 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 MERTKQ12866 999 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 HES1Q14469 280 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 KIAA0895LQ68EN5 471 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 KBTBD6Q86V97 674 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 SHC3Q92529 594 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 COPS5Q92905 334 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 REEP2Q9BRK0 252 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 EIF5A2Q9GZV4 153 aaKnown RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 DCSTAMPQ9H295 470 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 NANSQ9NR45 359 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 BARHL2Q9NY43 387 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 RIC1Q4ADV7 1423 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 LCKP06239 509 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 GABRB2P47870 512 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 ZCCHC23Q6ZST2 131 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 GPR152Q8TDT2 470 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 CCDC107Q8WV48 283 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 RIT2Q99578 217 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 C12orf57Q99622 126 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 LRRC4CQ9HCJ2 640 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 MYNNQ9NPC7 610 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 LIN7CQ9NUP9 197 aaKnown RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 A0A087X1B8 175 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 TCAPO15273 167 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 PFKLP17858 780 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 PPIGQ13427 754 aaKnown RBP eCLIP8.6□□□□□ -1.03
CDH8-203ENST00000577390 NTRK3Q16288 839 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 TMEM69Q5SWH9 247 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 CAPN13Q6MZZ7 669 aaPredicted RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 SORCS1Q8WY21 1168 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 TBX5Q99593 518 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 NT5C1B-RDH14C9J2C7 533 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 TERTO14746 1132 aaKnown RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 HTRA2O43464 458 aaPredicted RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 ETV5P41161 510 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 PAN3Q58A45 887 aaKnown RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 IRF2BP1Q8IU81 584 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 AADATQ8N5Z0 425 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 THAP6Q8TBB0 222 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 THAP3Q8WTV1 239 aaPredicted RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 FAM83CQ9BQN1 747 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 GPN2Q9H9Y4 310 aaPredicted RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 RAB19A4D1S5 217 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 PRMT5O14744 637 aaPredicted RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 HGFP14210 728 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 CYP3A5P20815 502 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 MAOBP27338 520 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 NDST2P52849 883 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 C1QTNF8P60827 252 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 BTN1A1Q13410 526 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 SERINC3Q13530 473 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 LRRC66Q68CR7 880 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 EIF5AL1Q6IS14 154 aaKnown RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 SLC47A1Q96FL8 570 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 MRPS30Q9NP92 439 aaKnown RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 ABCC13Q9NSE7 274 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 ASTN2O75129 1339 aaPredicted RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 SIGLEC16A6NMB1 481 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 SMIM18P0DKX4 95 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 TRIM28Q13263 835 aaKnown RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 APOFQ13790 326 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 HJURPQ8NCD3 748 aaPredicted RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 MALSU1Q96EH3 234 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 SPATA31C2B4DYI2 1134 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 BUD23O43709 281 aaKnown RBP8.6□□□□□ -1.03
CDH8-203ENST00000577390 TRBC1P01850 177 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 TACSTD2P09758 323 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 OR12D1P0DN82 309 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 YBX3P16989 372 aaKnown RBP eCLIP8.6□□□□□ -1.03
CDH8-203ENST00000577390 GNB2P62879 340 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 LIPEQ05469 1076 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 ADGRD1Q6QNK2 874 aa8.6□□□□□ -1.03
CDH8-203ENST00000577390 MPZL3Q6UWV2 235 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms