RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 ARG2P78540 354 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 ZNF33BQ06732 778 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 DLG1Q12959 904 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 ABRAXAS2Q15018 415 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 BTBD16Q32M84 506 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 KBTBD12Q3ZCT8 623 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 TOR1AIP1Q5JTV8 583 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 MAATS1Q7Z4T9 603 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 CMC1Q7Z7K0 106 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 CTAGE3PQ8IX95 158 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.2□□□□□ -0.62
LITAF-219ENST00000576334 PPM1NQ8N819 430 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 BBOF1Q8ND07 529 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 NT5CQ8TCD5 201 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 CREB3L4Q8TEY5 395 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 METTL21AQ8WXB1 218 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 EXT2Q93063 718 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 MRRFQ96E11 262 aaKnown RBP11.2□□□□□ -0.62
LITAF-219ENST00000576334 VPS50Q96JG6 964 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 TAAR6Q96RI8 345 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 LMF1Q96S06 567 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 RBBP8Q99708 897 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 SARGQ9BW04 601 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 SLC29A3Q9BZD2 475 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 RHBGQ9H310 441 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 PELI2Q9HAT8 420 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 LRRC4CQ9HCJ2 640 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 ANKRD10Q9NXR5 420 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 SLC22A7Q9Y694 548 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 ZGRF1Q86YA3 2104 aa11.2□□□□□ -0.62
LITAF-219ENST00000576334 SPTBN1Q01082 2364 aaKnown RBP11.19□□□□□ -0.62
LITAF-219ENST00000576334 KLHL41O60662 606 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 TBX6O95947 436 aaPredicted RBP11.19□□□□□ -0.62
LITAF-219ENST00000576334 GP1BBP13224 206 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 COL8A1P27658 744 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 HNRNPH1P31943 449 aaKnown RBP11.19□□□□□ -0.62
LITAF-219ENST00000576334 MAGEA4P43358 317 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 TSFMP43897 325 aaKnown RBP11.19□□□□□ -0.62
LITAF-219ENST00000576334 HSPA7P48741 367 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 SLC12A2P55011 1212 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 CDKL1Q00532 357 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 PMP22Q01453 160 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 POU4F1Q01851 419 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 PWP1Q13610 501 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 TLR1Q15399 786 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 TGFBIQ15582 683 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 NSDHLQ15738 373 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 SFT2D3Q587I9 215 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 SLCO4C1Q6ZQN7 724 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 FRA10AC1Q70Z53 315 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 VN1R5Q7Z5H4 357 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 KIF2BQ8N4N8 673 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 FBF1Q8TES7 1133 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 SSC4DQ8WTU2 575 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 GPR22Q99680 433 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 CPNE1Q99829 537 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 LRRC1Q9BTT6 524 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 TUBB6Q9BUF5 446 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 HES7Q9BYE0 225 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 SLC6A16Q9GZN6 736 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 DERL2Q9GZP9 239 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 NSMCE4AQ9NXX6 385 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 CROCCQ5TZA2 2017 aa11.19□□□□□ -0.62
LITAF-219ENST00000576334 MYOCOSA0A1B0GUC4 107 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 DYTNA2CJ06 578 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 A8MUA0 341 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 EIF3HO15372 352 aaKnown RBP eCLIP11.18□□□□□ -0.62
LITAF-219ENST00000576334 FHP07954 510 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 SMIM10L1P0DMW3 83 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 C1GALT1C1LP0DN25 315 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 STMN1P16949 149 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 EPORP19235 508 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 CD22P20273 847 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 MAOAP21397 527 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 AHRP35869 848 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 GP5P40197 560 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 RGS1Q08116 209 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 SLBPQ14493 270 aaKnown RBP eCLIP11.18□□□□□ -0.62
LITAF-219ENST00000576334 HERC3Q15034 1050 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 PAPD4Q6PIY7 484 aaKnown RBP11.18□□□□□ -0.62
LITAF-219ENST00000576334 ADAMTSL2Q86TH1 951 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 GPSM1Q86YR5 675 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 BEST3Q8N1M1 668 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 TMEM52Q8NDY8 209 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 PLPP5Q8NEB5 264 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 FAR1Q8WVX9 515 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 ANKRD7Q92527 254 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 HAS2Q92819 552 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 TBC1D20Q96BZ9 403 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 SMIM10Q96HG1 83 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 C16orf45Q96MC5 204 aaPredicted RBP11.18□□□□□ -0.62
LITAF-219ENST00000576334 AIF1LQ9BQI0 150 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.18□□□□□ -0.625e-7■■□□□ 11.6
LITAF-219ENST00000576334 POPDC3Q9HBV1 291 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 NECTIN3Q9NQS3 549 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 STMN3Q9NZ72 180 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 WWOXQ9NZC7 414 aa11.18□□□□□ -0.62
LITAF-219ENST00000576334 PLEKHB1Q9UF11 243 aaPredicted RBP11.18□□□□□ -0.62
LITAF-219ENST00000576334 UTP11Q9Y3A2 253 aaKnown RBP11.18□□□□□ -0.62
LITAF-219ENST00000576334 KCNE2Q9Y6J6 123 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms