RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	SIRT6	Q8N6T7	355 aa		13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	EFCAB3	Q8N7B9	438 aa		13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	DNAJB14	Q8TBM8	379 aa		13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	BRIX1	Q8TDN6	353 aa	Known RBP	13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	UTP15	Q8TED0	518 aa	Known RBP	13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	CREB3L4	Q8TEY5	395 aa		13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	PEX11G	Q96HA9	241 aa		13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	SMIM10	Q96HG1	83 aa		13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	BARD1	Q99728	777 aa	Known RBP	13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	WDR77	Q9BQA1	342 aa	Predicted RBP	13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	RBCK1	Q9BYM8	510 aa		13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	SLC6A16	Q9GZN6	736 aa		13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	PELI2	Q9HAT8	420 aa		13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	PLA2G3	Q9NZ20	509 aa		13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	PTGFRN	Q9P2B2	879 aa		13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	VPS4A	Q9UN37	437 aa		13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	DYRK1B	Q9Y463	629 aa		13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	PCDHGA10	Q9Y5H3	936 aa		13.37	□□□□□ -0.27
EDC4-210	ENST00000575507	KCNE2	Q9Y6J6	123 aa		13.37	□□□□□ -0.27
EDC4-210	ENST00000575507		A0A087WUV0	522 aa	Predicted RBP	13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	PABPN1L	A6NDY0	278 aa	Known RBP	13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	CHST10	O43529	356 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	CDC123	O75794	336 aa	Predicted RBP	13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	TBX6	O95947	436 aa	Predicted RBP	13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	SERPINA7	P05543	415 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	SLC35G6	P0C7Q6	338 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	SLC35E2B	P0CK96	405 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	C8orf89	P0DMQ9	161 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	C1GALT1C1L	P0DN25	315 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	ALOX12	P18054	663 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	EPOR	P19235	508 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	SPR	P35270	261 aa	Predicted RBP	13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	AHR	P35869	848 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	GGT5	P36269	586 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	GLRB	P48167	497 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	HNMT	P50135	292 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	RAB8A	P61006	207 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	RHAG	Q02094	409 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	ILF2	Q12905	390 aa	Known RBP	13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	MFAP5	Q13361	173 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	NAB1	Q13506	487 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	MINDY4	Q4G0A6	757 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	MFSD4B	Q5TF39	518 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	ADNP2	Q6IQ32	1131 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	CPEB2	Q7Z5Q1	589 aa	Known RBP	13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	ANKRD37	Q7Z713	158 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	ADAMTSL2	Q86TH1	951 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	GPSM1	Q86YR5	675 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	IQCK	Q8N0W5	287 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	PPP4R1	Q8TF05	950 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	LMF1	Q96S06	567 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	MAP10	Q9P2G4	905 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	TXNDC16	Q9P2K2	825 aa		13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	PTBP2	Q9UKA9	531 aa	Known RBP	13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	ZNF490	Q9ULM2	529 aa	Predicted RBP	13.36	□□□□□ -0.27
EDC4-210	ENST00000575507	HEATR5B	Q9P2D3	2071 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	FAM227A	F5H4B4	570 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	KLHL41	O60662	606 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	SEMA7A	O75326	666 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	SEC24D	O94855	1032 aa	Predicted RBP	13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	CBX6	O95503	412 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	F10	P00742	488 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	RNF224	P0DH78	156 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	CD22	P20273	847 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	HSPA7	P48741	367 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	ST13	P50502	369 aa	Known RBP	13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	RAB10	P61026	200 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	BTG2	P78543	158 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	FRA10AC1	Q70Z53	315 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	VN1R5	Q7Z5H4	357 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	ISCA2	Q86U28	154 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	TM9SF4	Q92544	642 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	TSLP	Q969D9	159 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	KIAA1191	Q96A73	305 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	MRRF	Q96E11	262 aa	Known RBP	13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	TSPAN17	Q96FV3	270 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	VPS50	Q96JG6	964 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	AIF1L	Q9BQI0	150 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	ACSS3	Q9H6R3	686 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	IGSF5	Q9NSI5	407 aa		13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	COPG1	Q9Y678	874 aa	Known RBP	13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	SPEN	Q96T58	3664 aa	Known RBP	13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	MDC1	Q14676	2089 aa	Known RBP	13.35	□□□□□ -0.27
EDC4-210	ENST00000575507	GNAZ	P19086	355 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	HNRNPH1	P31943	449 aa	Known RBP	13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	HSD17B3	P37058	310 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	ATP6V0D1	P61421	351 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	IRF9	Q00978	393 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	CDC16	Q13042	620 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	BMPR2	Q13873	1038 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	SLBP	Q14493	270 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	SLC29A2	Q14542	456 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	HERC3	Q15034	1050 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	NR6A1	Q15406	480 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	TOR1AIP1	Q5JTV8	583 aa		13.34	□□□□□ -0.27
EDC4-210	ENST00000575507	IRAK1BP1	Q5VVH5	260 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms