RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 ERVW-1Q9UQF0 538 aa9.25□□□□□ -0.93
CCDC40-212ENST00000574799 NOD1Q9Y239 953 aa9.25□□□□□ -0.93
CCDC40-212ENST00000574799 A0A1W2PQ45 241 aaPredicted RBP9.24□□□□□ -0.93
CCDC40-212ENST00000574799 A0A1W2PQY0 241 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 WASHC1A8K0Z3 465 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 ARNTLO00327 626 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 OR1I1O60431 355 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 WBP4O75554 376 aaKnown RBP9.24□□□□□ -0.93
CCDC40-212ENST00000574799 B3GAT3O94766 335 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 IFNA7P01567 189 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 OPN1SWP03999 348 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 FDXRP22570 491 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 RFX2P48378 723 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 MAN2A2P49641 1150 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 KCNQ1P51787 676 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 ABHD18Q0P651 414 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 ARHGEF7Q14155 803 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 GBX1Q14549 363 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 SPDYE7PQ495Y7 208 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 CYP27C1Q4G0S4 372 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 MFSD14CQ5VZR4 134 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 KIAA1841Q6NSI8 718 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 ZNF367Q7RTV3 350 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 KCTD20Q7Z5Y7 419 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 Q8N402 240 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 C9orf43Q8TAL5 461 aaPredicted RBP9.24□□□□□ -0.93
CCDC40-212ENST00000574799 CCM2Q9BSQ5 444 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 EIF3KQ9UBQ5 218 aaKnown RBP9.24□□□□□ -0.93
CCDC40-212ENST00000574799 SCN8AQ9UQD0 1980 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 RPP40O75818 363 aaKnown RBP9.24□□□□□ -0.93
CCDC40-212ENST00000574799 SLC22A5O76082 557 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 HOXB6P17509 224 aaKnown RBP9.24□□□□□ -0.93
CCDC40-212ENST00000574799 RPS19P39019 145 aaKnown RBP9.24□□□□□ -0.93
CCDC40-212ENST00000574799 CRISP3P54108 245 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 VLDLRP98155 873 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 SLC10A7Q0GE19 358 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 GTF2H2Q13888 395 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 IQCCQ4KMZ1 466 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 RUNDC3AQ59EK9 446 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 LIPKQ5VXJ0 399 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 BICRALQ6AI39 1079 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 KDM4DQ6B0I6 523 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 GTF2H2CQ6P1K8 395 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 SNX20Q7Z614 316 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 ADGRD2Q7Z7M1 963 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 CD99L2Q8TCZ2 262 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 SELENOMQ8WWX9 145 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 TESCQ96BS2 214 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 EXOC2Q96KP1 924 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 MAGEB10Q96LZ2 347 aaPredicted RBP9.24□□□□□ -0.93
CCDC40-212ENST00000574799 CCDC115Q96NT0 180 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 PSKH2Q96QS6 385 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 DPH2Q9BQC3 489 aaPredicted RBP9.24□□□□□ -0.93
CCDC40-212ENST00000574799 SAV1Q9H4B6 383 aaPredicted RBP9.24□□□□□ -0.93
CCDC40-212ENST00000574799 NIPAL2Q9H841 368 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 C11orf16Q9NQ32 467 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 NDRG4Q9ULP0 352 aaKnown RBP9.24□□□□□ -0.93
CCDC40-212ENST00000574799 TMCC3Q9ULS5 477 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 PCDHGB3Q9Y5G1 929 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 TNPO3Q9Y5L0 923 aaKnown RBP9.24□□□□□ -0.93
CCDC40-212ENST00000574799 ARPC4-TTLL3A0A0A6YYG9 625 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 LOC102723532A0A0G2JNH3 316 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 GFRA2O00451 464 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 CCNB2O95067 398 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 DHFRP00374 187 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 C1QBP02746 253 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 HMBSP08397 361 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 CTRB1P17538 263 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 POU3F3P20264 500 aaPredicted RBP9.24□□□□□ -0.93
CCDC40-212ENST00000574799 GPC1P35052 558 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 MNX1P50219 401 aaPredicted RBP9.24□□□□□ -0.93
CCDC40-212ENST00000574799 CASP9P55211 416 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 COX10Q12887 443 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 C18orf21Q32NC0 220 aaPredicted RBP9.24□□□□□ -0.93
CCDC40-212ENST00000574799 SIRPB2Q5JXA9 342 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 CTRB2Q6GPI1 263 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 CFAP77Q6ZQR2 320 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 C7orf57Q8NEG2 295 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 OR4K2Q8NGD2 314 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 EEF1AKMT1Q8WVE0 214 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 FUBP1Q96AE4 644 aaKnown RBP9.24□□□□□ -0.93
CCDC40-212ENST00000574799 EGLN2Q96KS0 407 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 GTPBP2Q9BX10 602 aaKnown RBP9.24□□□□□ -0.93
CCDC40-212ENST00000574799 GALNT9Q9HCQ5 603 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 BPIFA1Q9NP55 256 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 SRRDQ9UH36 339 aa9.24□□□□□ -0.93
CCDC40-212ENST00000574799 TRAV6A0A075B6T7 132 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 LCHNA4D1U4 455 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 RFPL3O75679 317 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 TOXO94900 526 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 OAZ2O95190 189 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 FCER2P06734 321 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 SSTR2P30874 369 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 SDC2P34741 201 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 GDF5P43026 501 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 PTPN5P54829 565 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 RPS14P62263 151 aaKnown RBP9.23□□□□□ -0.93
CCDC40-212ENST00000574799 ATG9BQ674R7 924 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 RNF130Q86XS8 419 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 LGI4Q8N135 537 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms