RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 MLYCDO95822 493 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 SERPINA6P08185 405 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 SFTPCP11686 197 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 CPA3P15088 417 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 H2AFXP16104 143 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-213ENST00000573577 ITGAXP20702 1163 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 AVPR1BP47901 424 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 STXBP1P61764 594 aaKnown RBP12.86□□□□□ -0.35
RPAIN-213ENST00000573577 PHEXP78562 749 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 ASPHQ12797 758 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 KCNAB2Q13303 367 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 SLC9A5Q14940 896 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 HERC3Q15034 1050 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 RBBP7Q16576 425 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 ZNF678Q5SXM1 525 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 FAM69BQ5VUD6 431 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 MLIPQ5VWP3 458 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 TMEM214Q6NUQ4 689 aaKnown RBP12.86□□□□□ -0.35
RPAIN-213ENST00000573577 ABHD13Q7L211 337 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 HDXQ7Z353 690 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.86□□□□□ -0.35
RPAIN-213ENST00000573577 ZNF843Q8N446 348 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 ANKRD53Q8N9V6 530 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 NT5CQ8TCD5 201 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 ADAMTS17Q8TE56 1095 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 ZNF483Q8TF39 744 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-213ENST00000573577 SREK1Q8WXA9 508 aaKnown RBP12.86□□□□□ -0.35
RPAIN-213ENST00000573577 THAP4Q8WY91 577 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 CCT6BQ92526 530 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 L3HYPDHQ96EM0 354 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 TMEM237Q96Q45 408 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 NTMT1Q9BV86 223 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 SYNPO2LQ9H987 977 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 ANKHQ9HCJ1 492 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 SSU72Q9NP77 194 aaKnown RBP12.86□□□□□ -0.35
RPAIN-213ENST00000573577 SEMA4BQ9NPR2 832 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-213ENST00000573577 MAN2B2Q9Y2E5 1009 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 PCDHGA11Q9Y5H2 935 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 SLC22A7Q9Y694 548 aa12.86□□□□□ -0.35
RPAIN-213ENST00000573577 MDC1Q14676 2089 aaKnown RBP12.85□□□□□ -0.35
RPAIN-213ENST00000573577 G3V2L1 256 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 SNPHO15079 494 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 PRAMEF4O60810 478 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 SPAG7O75391 227 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 KLF7O75840 302 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-213ENST00000573577 ONECUT2O95948 504 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 ALBP02768 609 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 STATHP02808 62 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 CD22P20273 847 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 DNAJB13P59910 316 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 CLCQ05315 142 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 TGM3Q08188 693 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 TNFAIP8L3Q5GJ75 292 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 CFAP157Q5JU67 520 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 C10orf62Q5T681 223 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-213ENST00000573577 PRAMEF9Q5VWM5 478 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 MRPL14Q6P1L8 145 aaKnown RBP12.85□□□□□ -0.35
RPAIN-213ENST00000573577 MILR1Q7Z6M3 343 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 LAS2Q8IYD9 372 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 L3MBTL4Q8NA19 623 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 KCT2Q8NC54 265 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 ARMC2Q8NEN0 867 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 TCP10LQ8TDR4 215 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 COL26A1Q96A83 441 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 FKBP10Q96AY3 582 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 FAM111AQ96PZ2 611 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 RHBGQ9H310 441 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 ZNF304Q9HCX3 659 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 SLC22A11Q9NSA0 550 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 OXSMQ9NWU1 459 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 TUBD1Q9UJT1 453 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 TSC22D4Q9Y3Q8 395 aa12.85□□□□□ -0.35
RPAIN-213ENST00000573577 A0A088AWK7 358 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 H0YIG0 161 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 H0YIV9 168 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 H3BQF6 201 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 OR7A17O14581 309 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 TM9SF1O15321 606 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 TYROBPO43914 113 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 CNOT3O75175 753 aaKnown RBP12.84□□□□□ -0.35
RPAIN-213ENST00000573577 MED26O95402 600 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 NSA2O95478 260 aaKnown RBP12.84□□□□□ -0.35
RPAIN-213ENST00000573577 PCNAP12004 261 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 ALOX12P18054 663 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 ZNF10P21506 573 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-213ENST00000573577 FBLP22087 321 aaKnown RBP12.84□□□□□ -0.35
RPAIN-213ENST00000573577 FOLR3P41439 243 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 PIK3CBP42338 1070 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 CDH13P55290 713 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 OCA2Q04671 838 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 C19orf57Q0VDD7 668 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 GGTA1PQ4G0N0 100 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 UNC50Q53HI1 259 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 LIPMQ5VYY2 423 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 EXOC3L1Q86VI1 746 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 APLFQ8IW19 511 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-213ENST00000573577 ARHGEF39Q8N4T4 335 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 METTL27Q8N6F8 245 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-213ENST00000573577 CCNYL1Q8N7R7 359 aa12.84□□□□□ -0.35
RPAIN-213ENST00000573577 SRFBP1Q8NEF9 429 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms