RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 RHBGQ9H310 441 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 WWOXQ9NZC7 414 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 WHRNQ9P202 907 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 CRYBG3Q68DQ2 2970 aa9.1□□□□□ -0.95
NPLOC4-212ENST00000573328 OR5H15A6NDH6 313 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 E2F3O00716 465 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 GALR3O60755 368 aaPredicted RBP9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 RASAL1O95294 804 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 LDLRP01130 860 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 S100BP04271 92 aaPredicted RBP9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 IL10P22301 178 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 AHRP35869 848 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 HNMTP50135 292 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 PER3P56645 1201 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 TAS2R50P59544 299 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 RAB8AP61006 207 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 CDKL1Q00532 357 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 POU4F1Q01851 419 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 ILF2Q12905 390 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 USP10Q14694 798 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 INAQ16352 499 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 TOR1AIP1Q5JTV8 583 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 PLAG1Q6DJT9 500 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 RPUSD3Q6P087 351 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 MYO7BQ6PIF6 2116 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 NXPE4Q6UWF7 544 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 CEP97Q8IW35 865 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 CTAGE3PQ8IX95 158 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 CYP4X1Q8N118 509 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 ANKRD53Q8N9V6 530 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 SPATA4Q8NEY3 305 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 NT5CQ8TCD5 201 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 ANKRD49Q8WVL7 239 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 ANKRD7Q92527 254 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 EXT2Q93063 718 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 TBC1D20Q96BZ9 403 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 FAR2Q96K12 515 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 IMMP1LQ96LU5 166 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 ZNF354BQ96LW1 612 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 PTCHD1Q96NR3 888 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 BARD1Q99728 777 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 ERP44Q9BS26 406 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 SARGQ9BW04 601 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 RNF32Q9H0A6 362 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 CAB39LQ9H9S4 337 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 POPDC3Q9HBV1 291 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 SMYD2Q9NRG4 433 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 STMN3Q9NZ72 180 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 MOCS1Q9NZB8 636 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 MTO1Q9Y2Z2 717 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 UTP11Q9Y3A2 253 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 CACNA1DQ01668 2161 aa9.09□□□□□ -0.95
NPLOC4-212ENST00000573328 DOPEY1Q5JWR5 2465 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 MAGEB17A8MXT2 336 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 CLGNO14967 610 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 FANCGO15287 622 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 TP73O15350 636 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 EIF3HO15372 352 aaKnown RBP eCLIP9.08□□□□□ -0.962e-7■□□□□ 11
NPLOC4-212ENST00000573328 PHGDHO43175 533 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 LRRTM2O43300 516 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 CHST10O43529 356 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 PRMT3O60678 531 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 PRAMEF2O60811 474 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 H2AFYO75367 372 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 CRYABP02511 175 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 CCDC166P0CW27 439 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 RNH1P13489 461 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 STMN1P16949 149 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 GNAZP19086 355 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 GDF5P43026 501 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 ST13P50502 369 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 PLTPP55058 493 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 KCNK10P57789 538 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 STXBP1P61764 594 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 RHAGQ02094 409 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 SLBPQ14493 270 aaKnown RBP eCLIP9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 SLMAPQ14BN4 828 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 TGFBIQ15582 683 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 MEP1AQ16819 746 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 C18orf21Q32NC0 220 aaPredicted RBP9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 ZNF766Q5HY98 468 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 ACER2Q5QJU3 275 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 RAPH1Q70E73 1250 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 MAMDC2Q7Z304 686 aaPredicted RBP9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 CRLF3Q8IUI8 442 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 BEST3Q8N1M1 668 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 KRT78Q8N1N4 520 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 C17orf53Q8N3J3 647 aaPredicted RBP9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 TCAIMQ8N3R3 496 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 SPATA6LQ8N4H0 392 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 AFAP1L2Q8N4X5 818 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 SLC5A8Q8N695 610 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 SNX31Q8N9S9 440 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 PLPP5Q8NEB5 264 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 ARMC2Q8NEN0 867 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 M1APQ8TC57 530 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 UTP15Q8TED0 518 aaKnown RBP9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 NR4A3Q92570 626 aa9.08□□□□□ -0.96
NPLOC4-212ENST00000573328 RBBP8Q99708 897 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms