RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 DPM1O60762 260 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 CYP7B1O75881 506 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 S100A1P23297 94 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 CD70P32970 193 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 PCGF2P35227 344 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 MICAQ29983 383 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 BBS7Q8IWZ6 715 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 OR2AP1Q8NGE2 309 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 TMEM121BQ9BXQ6 578 aaPredicted RBP16.79■□□□□ 0.28
SCARF1-205ENST00000571272 TPK1Q9H3S4 243 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 SPATA6Q9NWH7 488 aaPredicted RBP16.79■□□□□ 0.28
SCARF1-205ENST00000571272 FBXL12Q9NXK8 326 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 STOML2Q9UJZ1 356 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 ACSL6Q9UKU0 697 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 OR2AG2A6NM03 316 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 FAM47E-STBD1D6RA91 191 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 ANXA8P13928 327 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 ATP1B2P14415 290 aaPredicted RBP16.79■□□□□ 0.28
SCARF1-205ENST00000571272 IDSP22304 550 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 DEFA1P59665 94 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 DEFA3P59666 94 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 LMAN2Q12907 356 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 CCSMST1Q4G0I0 132 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 LIPJQ5W064 366 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 IL17RDQ8NFM7 739 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 CEP19Q96LK0 163 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 RAD9AQ99638 391 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 SDHCQ99643 169 aaPredicted RBP16.79■□□□□ 0.28
SCARF1-205ENST00000571272 MGLLQ99685 303 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 BRD9Q9H8M2 597 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 RHCGQ9UBD6 479 aa16.79■□□□□ 0.28
SCARF1-205ENST00000571272 TMEM202A6NGA9 273 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 LOC110117498-PIK3R3F6TDL0 507 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 APOA1P02647 267 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 EIF2S1P05198 315 aaKnown RBP16.78■□□□□ 0.28
SCARF1-205ENST00000571272 POU1F1P28069 291 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 SOX6P35712 828 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 IFI44LQ53G44 452 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 ZNF385BQ569K4 471 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 OR8H2Q8N162 312 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 DEPDC4Q8N2C3 294 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 OR4C15Q8NGM1 316 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 NFKBIDQ8NI38 313 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 SCAMP4Q969E2 229 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 ZNF556Q9HAH1 456 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 YIPF1Q9Y548 306 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 LAMA2P24043 3122 aaKnown RBP16.78■□□□□ 0.28
SCARF1-205ENST00000571272 ZW10O43264 779 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 HBA1P69905 142 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 TEAD4Q15561 434 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 DENND6BQ8NEG7 585 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 EXOSC4Q9NPD3 245 aaKnown RBP16.78■□□□□ 0.28
SCARF1-205ENST00000571272 KLHL42Q9P2K6 505 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 BTNL2Q9UIR0 455 aa16.78■□□□□ 0.28
SCARF1-205ENST00000571272 GREM1O60565 184 aa16.77■□□□□ 0.28
SCARF1-205ENST00000571272 MAPK8P45983 427 aa16.77■□□□□ 0.28
SCARF1-205ENST00000571272 LIMK1P53667 647 aa16.77■□□□□ 0.28
SCARF1-205ENST00000571272 AP1S2P56377 157 aa16.77■□□□□ 0.28
SCARF1-205ENST00000571272 PTGES3Q15185 160 aaKnown RBP16.77■□□□□ 0.28
SCARF1-205ENST00000571272 USP45Q70EL2 814 aa16.77■□□□□ 0.28
SCARF1-205ENST00000571272 TMEM150AQ86TG1 271 aa16.77■□□□□ 0.28
SCARF1-205ENST00000571272 RAVER1Q8IY67 606 aaKnown RBP16.77■□□□□ 0.28
SCARF1-205ENST00000571272 OR5AK3PQ8NH89 298 aa16.77■□□□□ 0.28
SCARF1-205ENST00000571272 C11orf24Q96F05 449 aaPredicted RBP16.77■□□□□ 0.28
SCARF1-205ENST00000571272 EMILIN2Q9BXX0 1053 aa16.77■□□□□ 0.28
SCARF1-205ENST00000571272 MKLN1Q9UL63 735 aa16.77■□□□□ 0.28
SCARF1-205ENST00000571272 LINC00854A0A1B0GVQ3 168 aa16.77■□□□□ 0.27
SCARF1-205ENST00000571272 AP3D1O14617 1153 aa16.77■□□□□ 0.27
SCARF1-205ENST00000571272 RGS5O15539 181 aa16.77■□□□□ 0.27
SCARF1-205ENST00000571272 KRT8P05787 483 aa16.77■□□□□ 0.27
SCARF1-205ENST00000571272 C1SP09871 688 aa16.77■□□□□ 0.27
SCARF1-205ENST00000571272 PIK3CBP42338 1070 aa16.77■□□□□ 0.27
SCARF1-205ENST00000571272 PRIM2P49643 509 aa16.77■□□□□ 0.27
SCARF1-205ENST00000571272 OLR1P78380 273 aa16.77■□□□□ 0.27
SCARF1-205ENST00000571272 BCL7AQ4VC05 210 aa16.77■□□□□ 0.27
SCARF1-205ENST00000571272 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.77■□□□□ 0.27
SCARF1-205ENST00000571272 DNAJB7Q7Z6W7 309 aaPredicted RBP16.77■□□□□ 0.27
SCARF1-205ENST00000571272 GATAD2AQ86YP4 633 aa16.77■□□□□ 0.27
SCARF1-205ENST00000571272 VOPP1Q96AW1 172 aa16.77■□□□□ 0.27
SCARF1-205ENST00000571272 SAMD11Q96NU1 681 aa16.77■□□□□ 0.27
SCARF1-205ENST00000571272 LYSMD1Q96S90 227 aa16.77■□□□□ 0.27
SCARF1-205ENST00000571272 FAM129BQ96TA1 746 aa16.77■□□□□ 0.27
SCARF1-205ENST00000571272 ZDHHC6Q9H6R6 413 aa16.77■□□□□ 0.27
SCARF1-205ENST00000571272 MAP4K5Q9Y4K4 846 aa16.77■□□□□ 0.27
SCARF1-205ENST00000571272 CCDC88CQ9P219 2028 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 IGLV3-16A0A075B6K0 115 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 PNMA8CA0A1B0GUJ8 204 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 SERTM1A2A2V5 107 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 PDZK1P1A8MUH7 402 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 ARHGEF33A8MVX0 844 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 H3BM21 787 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 EIF3FO00303 357 aaPredicted RBP16.76■□□□□ 0.27
SCARF1-205ENST00000571272 ARHGAP33O14559 1287 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 CA12O43570 354 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 MPC1LP0DKB6 136 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 SLC15A1P46059 708 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 PXNP49023 591 aaPredicted RBP16.76■□□□□ 0.27
SCARF1-205ENST00000571272 MVDP53602 400 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 OR2B6P58173 313 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 SCARB2Q14108 478 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms