RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 MASP1P48740 699 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 NUMBP49757 651 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 ALDH3A2P51648 485 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 RRAS2P62070 204 aaPredicted RBP10.47□□□□□ -0.73
CLK3-226ENST00000569406 DSC2Q02487 901 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 TP53BP2Q13625 1128 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 LARS2Q15031 903 aaKnown RBP10.47□□□□□ -0.73
CLK3-226ENST00000569406 SNAPC1Q16533 368 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 CCL14Q16627 93 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 EIF2S3LQ2VIR3 472 aaKnown RBP10.47□□□□□ -0.73
CLK3-226ENST00000569406 SYT6Q5T7P8 510 aaPredicted RBP10.47□□□□□ -0.73
CLK3-226ENST00000569406 TRMT11Q7Z4G4 463 aaKnown RBP10.47□□□□□ -0.73
CLK3-226ENST00000569406 AQP12AQ8IXF9 295 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 RDH10Q8IZV5 341 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 TTC29Q8NA56 475 aaPredicted RBP10.47□□□□□ -0.73
CLK3-226ENST00000569406 ANKRD52Q8NB46 1076 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 WNT8BQ93098 351 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 REPS1Q96D71 796 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 CXorf58Q96LI9 332 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 SCN3BQ9NY72 215 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 KLK14Q9P0G3 267 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 ZMIZ1Q9ULJ6 1067 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 RUVBL2Q9Y230 463 aaKnown RBP10.47□□□□□ -0.73
CLK3-226ENST00000569406 RNF6Q9Y252 685 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 SMIM35A0A1B0GVV1 85 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 FAM234BA2RU67 622 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 MOCS2O96007 188 aaPredicted RBP10.47□□□□□ -0.73
CLK3-226ENST00000569406 ZNF8P17098 575 aaPredicted RBP10.47□□□□□ -0.73
CLK3-226ENST00000569406 JUNDP17535 347 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 CD79BP40259 229 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 ACTR1BP42025 376 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 RABGGTBP53611 331 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 FAM110CQ1W6H9 321 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 MICAQ29983 383 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 HAGHLQ6PII5 290 aaPredicted RBP10.47□□□□□ -0.73
CLK3-226ENST00000569406 TMPRSS11AQ6ZMR5 421 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 KANSL1Q7Z3B3 1105 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 CCDC190Q86UF4 302 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 UNC93AQ86WB7 457 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 BPIFB1Q8TDL5 484 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 DNAJB3Q8WWF6 145 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 QRFPRQ96P65 431 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 PAK5Q9P286 719 aa10.47□□□□□ -0.73
CLK3-226ENST00000569406 EFCAB10A6NFE3 127 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 E9PI62 339 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 RBBP9O75884 186 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 MPC2O95563 127 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 TSHRP16473 764 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 TFEBP19484 476 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 CTGFP29279 349 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 RPL14P50914 215 aaKnown RBP10.46□□□□□ -0.73
CLK3-226ENST00000569406 KCNAB2Q13303 367 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 MANEAQ5SRI9 462 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 OVCH2Q7RTZ1 564 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 PID1Q7Z2X4 250 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 COQ10AQ96MF6 247 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 HEXA-AS1Q9H8Q6 139 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 NLKQ9UBE8 527 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 CHD5Q8TDI0 1954 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 WDR27A2RRH5 827 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 H7C0S8 307 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 S100A8P05109 93 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 ADRB1P08588 477 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 NUDT7P0C024 238 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 PRKAR1AP10644 381 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 HAPLN1P10915 354 aaPredicted RBP10.46□□□□□ -0.73
CLK3-226ENST00000569406 ARSAP15289 507 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 ZNF37AP17032 561 aaPredicted RBP10.46□□□□□ -0.73
CLK3-226ENST00000569406 CYP2F1P24903 491 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 CTSKP43235 329 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 NDUFV1P49821 464 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 RNF144AP50876 292 aaPredicted RBP10.46□□□□□ -0.73
CLK3-226ENST00000569406 POU4F2Q12837 409 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 SPRYD7Q5W111 196 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 NLRC3Q7RTR2 1065 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 PSTKQ8IV42 348 aaKnown RBP10.46□□□□□ -0.73
CLK3-226ENST00000569406 COQ8AQ8NI60 647 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 EXT2Q93063 718 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 PGLYRP2Q96PD5 576 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 SORCS2Q96PQ0 1159 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 KLHL8Q9P2G9 620 aaPredicted RBP10.46□□□□□ -0.73
CLK3-226ENST00000569406 TPRKBQ9Y3C4 175 aa10.46□□□□□ -0.73
CLK3-226ENST00000569406 MYLKQ15746 1914 aa10.46□□□□□ -0.74
CLK3-226ENST00000569406 FAM240BA0A1B0GVZ2 78 aa10.46□□□□□ -0.74
CLK3-226ENST00000569406 GPR171O14626 319 aa10.46□□□□□ -0.74
CLK3-226ENST00000569406 GABRDO14764 452 aa10.46□□□□□ -0.74
CLK3-226ENST00000569406 CREG1O75629 220 aa10.46□□□□□ -0.74
CLK3-226ENST00000569406 PRKCGP05129 697 aa10.46□□□□□ -0.74
CLK3-226ENST00000569406 CNPP09543 421 aaKnown RBP10.46□□□□□ -0.74
CLK3-226ENST00000569406 LCP1P13796 627 aa10.46□□□□□ -0.74
CLK3-226ENST00000569406 LBPP18428 481 aa10.46□□□□□ -0.74
CLK3-226ENST00000569406 CD6P30203 668 aa10.46□□□□□ -0.74
CLK3-226ENST00000569406 CASP2P42575 452 aa10.46□□□□□ -0.74
CLK3-226ENST00000569406 OR1G1P47890 313 aa10.46□□□□□ -0.74
CLK3-226ENST00000569406 LILRA4P59901 499 aa10.46□□□□□ -0.74
CLK3-226ENST00000569406 STX4Q12846 297 aa10.46□□□□□ -0.74
CLK3-226ENST00000569406 IFRD2Q12894 506 aaPredicted RBP10.46□□□□□ -0.74
CLK3-226ENST00000569406 SGCGQ13326 291 aa10.46□□□□□ -0.74
CLK3-226ENST00000569406 CDH18Q13634 790 aa10.46□□□□□ -0.74
CLK3-226ENST00000569406 SNTB1Q13884 538 aaKnown RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms