RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 PRSS41Q7RTY9 318 aa17.51■□□□□ 0.39
LINC01238-205ENST00000567549 AGGF1Q8N302 714 aaeCLIP17.51■□□□□ 0.39
LINC01238-205ENST00000567549 AFAP1L2Q8N4X5 818 aa17.51■□□□□ 0.39
LINC01238-205ENST00000567549 NT5CQ8TCD5 201 aa17.51■□□□□ 0.39
LINC01238-205ENST00000567549 CENPEQ02224 2701 aa17.51■□□□□ 0.39
LINC01238-205ENST00000567549 CROCCQ5TZA2 2017 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 ARHGAP10A1A4S6 786 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 GABRR3A8MPY1 467 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 LCMT2O60294 686 aaKnown RBP17.5■□□□□ 0.39
LINC01238-205ENST00000567549 PRMT3O60678 531 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 SLC19A2O60779 497 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 H2AFYO75367 372 aaKnown RBP17.5■□□□□ 0.39
LINC01238-205ENST00000567549 F7P08709 466 aaPredicted RBP17.5■□□□□ 0.39
LINC01238-205ENST00000567549 RNH1P13489 461 aaKnown RBP17.5■□□□□ 0.39
LINC01238-205ENST00000567549 AGAP20933 346 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 PTGER4P35408 488 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 STXBP1P61764 594 aaKnown RBP17.5■□□□□ 0.39
LINC01238-205ENST00000567549 CDKL1Q00532 357 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 RHAGQ02094 409 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 FRG1Q14331 258 aaKnown RBP17.5■□□□□ 0.39
LINC01238-205ENST00000567549 DEFB134Q4QY38 66 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 RBM20Q5T481 1227 aaKnown RBP17.5■□□□□ 0.39
LINC01238-205ENST00000567549 TEDDM1Q5T9Z0 273 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 BNC2Q6ZN30 1099 aaPredicted RBP17.5■□□□□ 0.39
LINC01238-205ENST00000567549 FRA10AC1Q70Z53 315 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 PDSS2Q86YH6 399 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 CRLF3Q8IUI8 442 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 ZNF740Q8NDX6 193 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 ADAMTS18Q8TE60 1221 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 SEC16BQ96JE7 1060 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 EGFL8Q99944 293 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 MACROD1Q9BQ69 325 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 CAPS2Q9BXY5 557 aa17.5■□□□□ 0.39
LINC01238-205ENST00000567549 DDX47Q9H0S4 455 aaKnown RBP17.5■□□□□ 0.39
LINC01238-205ENST00000567549 CDC123O75794 336 aaPredicted RBP17.49■□□□□ 0.39
LINC01238-205ENST00000567549 GUCA1CO95843 209 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 TNFRSF8P28908 595 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 SLC12A2P55011 1212 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 SLC26A5P58743 744 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 GNG11P61952 73 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 MRGPRGQ86SM5 289 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 ADAMTSL2Q86TH1 951 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 MDS2Q8NDY4 140 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 PYCR2Q96C36 320 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 CFAP36Q96G28 342 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 FAR2Q96K12 515 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 GPR137Q96N19 417 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 PTCHD1Q96NR3 888 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 GPAMQ9HCL2 828 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 PRDM9Q9NQV7 894 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 LANCL2Q9NS86 450 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 LRFN1Q9P244 771 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 ITPR2Q14571 2701 aa17.49■□□□□ 0.39
LINC01238-205ENST00000567549 ZNF860A6NHJ4 632 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 FAM227AF5H4B4 570 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 CHST10O43529 356 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 TSPAN12O95859 305 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 SERPINA6P08185 405 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 ZNF888P0CJ79 500 aaPredicted RBP17.48■□□□□ 0.39
LINC01238-205ENST00000567549 ZNF37AP17032 561 aaPredicted RBP17.48■□□□□ 0.39
LINC01238-205ENST00000567549 GNAZP19086 355 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 GABRB3P28472 473 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 CASQ1P31415 396 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 CD96P40200 585 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 ELK3P41970 407 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 SCTRP47872 440 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 CYB561P49447 251 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 TIAL1Q01085 375 aaKnown RBP eCLIP17.48■□□□□ 0.39
LINC01238-205ENST00000567549 DR1Q01658 176 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 MGAT5Q09328 741 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 RCN2Q14257 317 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 KCTD19Q17RG1 926 aaPredicted RBP17.48■□□□□ 0.39
LINC01238-205ENST00000567549 SLC25A25Q6KCM7 469 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 SYT10Q6XYQ8 523 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 RPS19BP1Q86WX3 136 aaKnown RBP17.48■□□□□ 0.39
LINC01238-205ENST00000567549 GHDCQ8N2G8 530 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 POGLUT1Q8NBL1 392 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 C7orf57Q8NEG2 295 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 ZNF592Q92610 1267 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 NEIL2Q969S2 332 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 SCMH1Q96GD3 660 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 CCDC120Q96HB5 630 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 PITHD1Q9GZP4 211 aaPredicted RBP17.48■□□□□ 0.39
LINC01238-205ENST00000567549 KLHL1Q9NR64 748 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 CHMP2BQ9UQN3 213 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 SH2B3Q9UQQ2 575 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 MRPS33Q9Y291 106 aaKnown RBP17.48■□□□□ 0.39
LINC01238-205ENST00000567549 CRYBG3Q68DQ2 2970 aa17.48■□□□□ 0.39
LINC01238-205ENST00000567549 ASPDHA6ND91 283 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 CLDN4O14493 209 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 SP1P08047 785 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 MST1P26927 711 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 PAFAH1B1P43034 410 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 REEP5Q00765 189 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 RBBP5Q15291 538 aaKnown RBP17.47■□□□□ 0.39
LINC01238-205ENST00000567549 TERF2Q15554 542 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 FCRLBQ6BAA4 426 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 GDF7Q7Z4P5 450 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 TMPRSS11BQ86T26 416 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 THOC6Q86W42 341 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms