RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 MS4A8Q9BY19 250 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 C12orf65Q9H3J6 166 aaKnown RBP11.77□□□□□ -0.53
RNF40-211ENST00000567365 IPPKQ9H8X2 491 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 MAP4K5Q9Y4K4 846 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 MAU2Q9Y6X3 613 aa11.77□□□□□ -0.53
RNF40-211ENST00000567365 PPP6CO00743 305 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 DNAJB6O75190 326 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 CREB1P16220 341 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 ALOX12P18054 663 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 IL1RNP18510 177 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 IMPDH1P20839 514 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 FBLP22087 321 aaKnown RBP11.76□□□□□ -0.53
RNF40-211ENST00000567365 HNF4AP41235 474 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 CCT5P48643 541 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 IFFO1Q0D2I5 559 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 ERV3-1Q14264 604 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 HERC3Q15034 1050 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 RBBP5Q15291 538 aaKnown RBP11.76□□□□□ -0.53
RNF40-211ENST00000567365 LINC00303Q3SY05 128 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 GGTA1PQ4G0N0 100 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 PAGE2BQ5JRK9 111 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 ZNF678Q5SXM1 525 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 ZYG11AQ6WRX3 759 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 RPS27LQ71UM5 84 aaKnown RBP11.76□□□□□ -0.53
RNF40-211ENST00000567365 ZSCAN1Q8NBB4 408 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 ZCCHC10Q8TBK6 192 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 MS4A6EQ96DS6 147 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 CATSPER2Q96P56 530 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 QRFPRQ96P65 431 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 NOL11Q9H8H0 719 aaKnown RBP11.76□□□□□ -0.53
RNF40-211ENST00000567365 WDR70Q9NW82 654 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 GRID1Q9ULK0 1009 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 PPT2Q9UMR5 302 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 PADI2Q9Y2J8 665 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 PLLPQ9Y342 182 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 RNF11Q9Y3C5 154 aa11.76□□□□□ -0.53
RNF40-211ENST00000567365 PTRH2Q9Y3E5 179 aaKnown RBP11.76□□□□□ -0.53
RNF40-211ENST00000567365 A0A1W2PQ72 361 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 SGK494L7N484 410 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 COPEO14579 308 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 TYROBPO43914 113 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 KLHL18O94889 574 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 BMP10O95393 424 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 B3GALT4O96024 378 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 ZGLP1P0C6A0 271 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 ZNF888P0CJ79 500 aaPredicted RBP11.75□□□□□ -0.53
RNF40-211ENST00000567365 PRKAR1AP10644 381 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 CDH13P55290 713 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 MAT1AQ00266 395 aaKnown RBP11.75□□□□□ -0.53
RNF40-211ENST00000567365 RHDQ02161 417 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 SSPNQ14714 243 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 TBR1Q16650 682 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 SYT16Q17RD7 645 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 CCDC153Q494R4 210 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 VWA2Q5GFL6 755 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 MED27Q6P2C8 311 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 LRIG3Q6UXM1 1119 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 PPP1R32Q7Z5V6 425 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 UBE3DQ7Z6J8 389 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 LAPTM4BQ86VI4 370 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 ZC3H7AQ8IWR0 971 aaKnown RBP11.75□□□□□ -0.53
RNF40-211ENST00000567365 WDR20Q8TBZ3 569 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 RDH11Q8TC12 318 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 UBE2E3Q969T4 207 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 GAL3ST3Q96A11 431 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 COL26A1Q96A83 441 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 NACC2Q96BF6 587 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 MMABQ96EY8 250 aaPredicted RBP11.75□□□□□ -0.53
RNF40-211ENST00000567365 APOPT1Q96IL0 206 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 CLK4Q9HAZ1 481 aaKnown RBP11.75□□□□□ -0.53
RNF40-211ENST00000567365 MKKSQ9NPJ1 570 aaPredicted RBP11.75□□□□□ -0.53
RNF40-211ENST00000567365 ZNF282Q9UDV7 671 aaPredicted RBP11.75□□□□□ -0.53
RNF40-211ENST00000567365 NXT1Q9UKK6 140 aaKnown RBP11.75□□□□□ -0.53
RNF40-211ENST00000567365 NAALAD2Q9Y3Q0 740 aa11.75□□□□□ -0.53
RNF40-211ENST00000567365 ANKDD1BA6NHY2 528 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 FFAR3O14843 346 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 GPR42O15529 346 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 PRPF4O43172 522 aaKnown RBP eCLIP11.74□□□□□ -0.53
RNF40-211ENST00000567365 RDH16O75452 317 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 SCELO95171 688 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 CLDN9O95484 217 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 SERPIND1P05546 499 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 TAC1P20366 129 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 MMP11P24347 488 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 SERPINB1P30740 379 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 PIK3CBP42338 1070 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 AVPR1BP47901 424 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 DNAJB13P59910 316 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 CLCQ05315 142 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 KRT71Q3SY84 523 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 DEFB134Q4QY38 66 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 LETMD1Q6P1Q0 360 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 ABHD17CQ6PCB6 329 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 ABHD13Q7L211 337 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 SLC22A9Q8IVM8 553 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 APLFQ8IW19 511 aaPredicted RBP11.74□□□□□ -0.53
RNF40-211ENST00000567365 SRRM1Q8IYB3 904 aaKnown RBP11.74□□□□□ -0.53
RNF40-211ENST00000567365 RNF175Q8N4F7 328 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 OR2L5Q8NG80 312 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 HUS1BQ8NHY5 278 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms