RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 C1orf189Q5VU69 101 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 YOD1Q5VVQ6 348 aaPredicted RBP7.76□□□□□ -1.17
CDH13-208ENST00000566333 GARNL3Q5VVW2 1013 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 KANK2Q63ZY3 851 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 FRG2Q64ET8 278 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 CLEC6AQ6EIG7 209 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 UNQ6494/PRO21346Q6UXR6 183 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 TTLL10Q6ZVT0 673 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 UBE3DQ7Z6J8 389 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 MILR1Q7Z6M3 343 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 NUDCD3Q8IVD9 361 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 TMEM151BQ8IW70 566 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 TBC1D19Q8N5T2 526 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 METTL27Q8N6F8 245 aaPredicted RBP7.76□□□□□ -1.17
CDH13-208ENST00000566333 AMER3Q8N944 861 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 TTC29Q8NA56 475 aaPredicted RBP7.76□□□□□ -1.17
CDH13-208ENST00000566333 CAMKVQ8NCB2 501 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 TRPV3Q8NET8 790 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 PROKR1Q8TCW9 393 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 UTP15Q8TED0 518 aaKnown RBP7.76□□□□□ -1.17
CDH13-208ENST00000566333 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.76□□□□□ -1.17
CDH13-208ENST00000566333 UBE2E3Q969T4 207 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 ATP6V1E2Q96A05 226 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 GAL3ST3Q96A11 431 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 MS4A6EQ96DS6 147 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 SMIM10Q96HG1 83 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 CNDP1Q96KN2 507 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 FRG2BQ96QU4 278 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 HBEGFQ99075 208 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 MTERF1Q99551 399 aaKnown RBP7.76□□□□□ -1.17
CDH13-208ENST00000566333 KLHL31Q9H511 634 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 ZNF395Q9H8N7 513 aaPredicted RBP7.76□□□□□ -1.17
CDH13-208ENST00000566333 LHX9Q9NQ69 397 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 IRAK4Q9NWZ3 460 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 NKIRAS1Q9NYS0 192 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 HAO1Q9UJM8 370 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 TIMM22Q9Y584 194 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 PCDHGA11Q9Y5H2 935 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 PTGDR2Q9Y5Y4 395 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 BOD1L1Q8NFC6 3051 aa7.76□□□□□ -1.17
CDH13-208ENST00000566333 TLN1Q9Y490 2541 aaKnown RBP7.75□□□□□ -1.17
CDH13-208ENST00000566333 ZNF860A6NHJ4 632 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 TMEM114B3SHH9 223 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 MEN1O00255 615 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 FOXE1O00358 373 aaPredicted RBP7.75□□□□□ -1.17
CDH13-208ENST00000566333 MANBAO00462 879 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 PLPP1O14494 284 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 TXNDC9O14530 226 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 ERI3O43414 337 aaKnown RBP7.75□□□□□ -1.17
CDH13-208ENST00000566333 RAD1O60671 282 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 GALR3O60755 368 aaPredicted RBP7.75□□□□□ -1.17
CDH13-208ENST00000566333 CNOT3O75175 753 aaKnown RBP7.75□□□□□ -1.17
CDH13-208ENST00000566333 KLHL18O94889 574 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 NSA2O95478 260 aaKnown RBP7.75□□□□□ -1.17
CDH13-208ENST00000566333 ONECUT2O95948 504 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 PDYNP01213 254 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 JUNP05412 331 aaKnown RBP7.75□□□□□ -1.17
CDH13-208ENST00000566333 SERPIND1P05546 499 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 LIPCP11150 499 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 ATP1A2P50993 1020 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 NEK2P51955 445 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 EFNA3P52797 238 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 ARSFP54793 590 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 FOXL2P58012 376 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 RPS13P62277 151 aaKnown RBP7.75□□□□□ -1.17
CDH13-208ENST00000566333 OCRLQ01968 901 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 RGS1Q08116 209 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 SRSF6Q13247 344 aaKnown RBP7.75□□□□□ -1.17
CDH13-208ENST00000566333 CLN3Q13286 438 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 DDX39BQ13838 428 aaKnown RBP7.75□□□□□ -1.17
CDH13-208ENST00000566333 FAM53BQ14153 422 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 SLC9A5Q14940 896 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 TGIF1Q15583 401 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 UGT3A2Q3SY77 523 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 NKAIN1Q4KMZ8 207 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 MANEAQ5SRI9 462 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 C10orf62Q5T681 223 aaPredicted RBP7.75□□□□□ -1.17
CDH13-208ENST00000566333 KHDRBS2Q5VWX1 349 aaKnown RBP7.75□□□□□ -1.17
CDH13-208ENST00000566333 C6orf15Q6UXA7 325 aaPredicted RBP7.75□□□□□ -1.17
CDH13-208ENST00000566333 ZNF793Q6ZN11 406 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 RNF165Q6ZSG1 346 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 NLGN4XQ8N0W4 816 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 NLGN4YQ8NFZ3 816 aaPredicted RBP7.75□□□□□ -1.17
CDH13-208ENST00000566333 OR2L5Q8NG80 312 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 OR9A4Q8NGU2 314 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 RAB3IL1Q8TBN0 382 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 CT55Q8WUE5 264 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 CCT6BQ92526 530 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 REPS1Q96D71 796 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 CLIP3Q96DZ5 547 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 MVB12AQ96EY5 273 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 MAGEB10Q96LZ2 347 aaPredicted RBP7.75□□□□□ -1.17
CDH13-208ENST00000566333 QRFPRQ96P65 431 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 F2RL3Q96RI0 385 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 PAIP2Q9BPZ3 127 aaKnown RBP7.75□□□□□ -1.17
CDH13-208ENST00000566333 C17orf62Q9BQA9 187 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 NDC1Q9BTX1 674 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 NLNQ9BYT8 704 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 ACPTQ9BZG2 426 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 OR51B5Q9H339 312 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms