RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 CYLC2Q14093 348 aaPredicted RBP1.47□□□□□ -2.17
SMG1-212ENST00000566328 GCKRQ14397 625 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 ZRSR2Q15696 482 aaKnown RBP1.47□□□□□ -2.17
SMG1-212ENST00000566328 DUSP5Q16690 384 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 SLC22A6Q4U2R8 563 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 CTR9Q6PD62 1173 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 PRSS55Q6UWB4 352 aaPredicted RBP1.47□□□□□ -2.17
SMG1-212ENST00000566328 DEFB132Q7Z7B7 95 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 RYBPQ8N488 228 aaPredicted RBP1.47□□□□□ -2.17
SMG1-212ENST00000566328 GBP7Q8N8V2 638 aaPredicted RBP1.47□□□□□ -2.17
SMG1-212ENST00000566328 OR5M9Q8NGP3 310 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 LINC01006Q8NI28 216 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 FLVCR1-AS1Q8TAF5 88 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 ZNF721Q8TF20 911 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 PRAM1Q96QH2 718 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 ITPAQ9BY32 194 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 DEFB126Q9BYW3 111 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 IL1RAPQ9NPH3 570 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 ORC3Q9UBD5 711 aaPredicted RBP1.47□□□□□ -2.17
SMG1-212ENST00000566328 RSPH14Q9UHP6 348 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 PILRAQ9UKJ1 303 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 A2ML1A8K2U0 1454 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 PLA2R1Q13018 1463 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 TCOF1Q13428 1488 aaKnown RBP1.47□□□□□ -2.17
SMG1-212ENST00000566328 ADGBQ8N7X0 1667 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 PREX1Q8TCU6 1659 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 CNTLNQ9NXG0 1405 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 RIMS2Q9UQ26 1411 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 PTPN23Q9H3S7 1636 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 ALKQ9UM73 1620 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 VWDEQ8N2E2 1590 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 CEP170BQ9Y4F5 1589 aaPredicted RBP1.47□□□□□ -2.17
SMG1-212ENST00000566328 KANK1Q14678 1352 aa1.47□□□□□ -2.17
SMG1-212ENST00000566328 ABCC3O15438 1527 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 FAM135AQ9P2D6 1515 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 AFF2P51816 1311 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 KAT6BQ8WYB5 2073 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 PZPP20742 1482 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 ERVK-7P63135 1459 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 CEP350Q5VT06 3117 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 XIRP1Q702N8 1843 aaKnown RBP1.46□□□□□ -2.18
SMG1-212ENST00000566328 A0A087WZ39 114 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 MAGEB4O15481 346 aaPredicted RBP1.46□□□□□ -2.18
SMG1-212ENST00000566328 SNX3O60493 162 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 PEX14O75381 377 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 FOXH1O75593 365 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 MPZP25189 248 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 SPRP35270 261 aaPredicted RBP1.46□□□□□ -2.18
SMG1-212ENST00000566328 MEOX2P50222 304 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 WNT4P56705 351 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 OR1D5P58170 312 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 CUL3Q13618 768 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 SHHQ15465 462 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 LTB4RQ15722 352 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 C15orf59Q2T9L4 293 aaPredicted RBP1.46□□□□□ -2.18
SMG1-212ENST00000566328 VWA2Q5GFL6 755 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 SNX30Q5VWJ9 437 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 TMEM211Q6ICI0 200 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 PRR27Q6MZM9 219 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 ENTHD1Q8IYW4 607 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 GUF1Q8N442 669 aaKnown RBP1.46□□□□□ -2.18
SMG1-212ENST00000566328 PTPMT1Q8WUK0 201 aaPredicted RBP1.46□□□□□ -2.18
SMG1-212ENST00000566328 CASP10Q92851 521 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 MAGEB18Q96M61 343 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 SIGLEC12Q96PQ1 595 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 KLHL5Q96PQ7 755 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 IL12RB2Q99665 862 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 RTBDNQ9BSG5 229 aaPredicted RBP1.46□□□□□ -2.18
SMG1-212ENST00000566328 SLC26A6Q9BXS9 759 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 SEPT11Q9NVA2 429 aaKnown RBP1.46□□□□□ -2.18
SMG1-212ENST00000566328 POLLQ9UGP5 575 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 IL36AQ9UHA7 158 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 PIK3C2BO00750 1634 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 NOS1P29475 1434 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 NAIPQ13075 1403 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 ADAMTS13Q76LX8 1427 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 PLXNC1O60486 1568 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 NEURL4Q96JN8 1562 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 CFAP74Q9C0B2 1584 aa1.46□□□□□ -2.18
SMG1-212ENST00000566328 INO80Q9ULG1 1556 aaPredicted RBP1.46□□□□□ -2.18
SMG1-212ENST00000566328 EHBP1L1Q8N3D4 1523 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 DUOX2Q9NRD8 1548 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 TET3O43151 1660 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 IL16Q14005 1332 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 SCAF11Q99590 1463 aaKnown RBP1.45□□□□□ -2.18
SMG1-212ENST00000566328 MROH1Q8NDA8 1641 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 MYO3AQ8NEV4 1616 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 GPR75-ASB3A0A0A6YYF3 556 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 OR2A25A4D2G3 310 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 CTDSP2O14595 271 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 SAP30O75446 220 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 PIGRP01833 764 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 TM4SF1P30408 202 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 FCGR2BP31994 310 aaPredicted RBP1.45□□□□□ -2.18
SMG1-212ENST00000566328 FCGR2CP31995 323 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 GARSP41250 739 aaKnown RBP1.45□□□□□ -2.18
SMG1-212ENST00000566328 CRYBA2P53672 197 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 POM121L1PQ3SYA9 428 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 IGSF11Q5DX21 431 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 ZRANB3Q5FWF4 1079 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms