RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 PPP1R32Q7Z5V6 425 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 KRT78Q8N1N4 520 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 RIBC1Q8N443 379 aaPredicted RBP13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 TRPV3Q8NET8 790 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 OR9A4Q8NGU2 314 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 NT5CQ8TCD5 201 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 VPS50Q96JG6 964 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 EFCAB11Q9BUY7 163 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 TGIF2Q9GZN2 237 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 PITHD1Q9GZP4 211 aaPredicted RBP13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 ANKHQ9HCJ1 492 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 C14orf105Q9NVL8 296 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 DCDC2Q9UHG0 476 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 LGALS13Q9UHV8 139 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 ZNF490Q9ULM2 529 aaPredicted RBP13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 PLAAQ9Y263 795 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 PCDHGA9Q9Y5G4 932 aaKnown RBP13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 TNPO3Q9Y5L0 923 aaKnown RBP13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 SLC22A7Q9Y694 548 aa13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 FASNP49327 2511 aaKnown RBP13.11□□□□□ -0.31
HERPUD1-210ENST00000565966 URADA6NGE7 173 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 A8MT66 165 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 CEACAM4O75871 244 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 WFS1O76024 890 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 SERPIND1P05546 499 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 IL1RNP18510 177 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 EEF1DP29692 281 aaKnown RBP13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 GTF2H2Q13888 395 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 HERC3Q15034 1050 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 RBBP7Q16576 425 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 DCAF10Q5QP82 559 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 GTF2H2CQ6P1K8 395 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 TMIGD1Q6UXZ0 262 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 PRSS41Q7RTY9 318 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 GOLGA7Q7Z5G4 137 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 ZNF605Q86T29 641 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 LAPTM4BQ86VI4 370 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.1□□□□□ -0.312e-6■□□□□ 9.2
HERPUD1-210ENST00000565966 PRSS58Q8IYP2 241 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 TTLQ8NG68 377 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 ZCCHC10Q8TBK6 192 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 CREB3L4Q8TEY5 395 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 CRB3Q9BUF7 120 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 SLC25A23Q9BV35 468 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 TMEM109Q9BVC6 243 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 C3orf18Q9UK00 162 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 EMCNQ9ULC0 261 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 G3BP2Q9UN86 482 aaKnown RBP13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 TP53TG5Q9Y2B4 290 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 ANGPTL3Q9Y5C1 460 aa13.1□□□□□ -0.31
HERPUD1-210ENST00000565966 SOCS6O14544 535 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 FFAR3O14843 346 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 GPR42O15529 346 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 GLRA3O75311 464 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 ALOX12P18054 663 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 KRT4P19013 534 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 TAC1P20366 129 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 EMP2P54851 167 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 SKP1P63208 163 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 SLC18A2Q05940 514 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 HYAL2Q12891 473 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 LAPTM5Q13571 262 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 HIST2H2ACQ16777 129 aaPredicted RBP13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 SYT16Q17RD7 645 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 PAGE2BQ5JRK9 111 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 HIST2H2AA3Q6FI13 130 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 GRHL2Q6ISB3 625 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 NIPAL1Q6NVV3 410 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 KIRREL2Q6UWL6 708 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 ABHD13Q7L211 337 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 VN1R5Q7Z5H4 357 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 TRABD2AQ86V40 505 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 C4orf33Q8N1A6 199 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 AFAP1L2Q8N4X5 818 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 CLEC1AQ8NC01 280 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 OR51Q1Q8NH59 317 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 SEC16BQ96JE7 1060 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 SLC6A16Q9GZN6 736 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 AICDAQ9GZX7 198 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 MLXIPLQ9NP71 852 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 ATP13A2Q9NQ11 1180 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 PCTPQ9UKL6 214 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 NAALAD2Q9Y3Q0 740 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 PCDHGB7Q9Y5F8 929 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 HEMK1Q9Y5R4 338 aaPredicted RBP13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 HS3ST3B1Q9Y662 390 aa13.09□□□□□ -0.31
HERPUD1-210ENST00000565966 A6NL46 340 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 IDSB3KWA1 339 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 SGK494L7N484 410 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 PCDH17O14917 1159 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 DLX3O60479 287 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 KLHL41O60662 606 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 KLHL18O94889 574 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 BMP10O95393 424 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 PROCP04070 461 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 HEXBP07686 556 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 SERPINA6P08185 405 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 RPS17P08708 135 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 GSTM2P28161 218 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 CRHR1P34998 444 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms