RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 ZNF33BQ06732 778 aa24.7■■□□□ 1.54
NME3-208ENST00000565379 RGS1Q08116 209 aa24.7■■□□□ 1.54
NME3-208ENST00000565379 CHI3L2Q15782 390 aa24.7■■□□□ 1.54
NME3-208ENST00000565379 PRTGQ2VWP7 1150 aa24.7■■□□□ 1.54
NME3-208ENST00000565379 VN1R4Q7Z5H5 301 aa24.7■■□□□ 1.54
NME3-208ENST00000565379 KIRREL3Q8IZU9 778 aa24.7■■□□□ 1.54
NME3-208ENST00000565379 NT5CQ8TCD5 201 aa24.7■■□□□ 1.54
NME3-208ENST00000565379 AGAP11Q8TF27 550 aa24.7■■□□□ 1.54
NME3-208ENST00000565379 NDC1Q9BTX1 674 aa24.7■■□□□ 1.54
NME3-208ENST00000565379 SPRTNQ9H040 489 aaPredicted RBP24.7■■□□□ 1.54
NME3-208ENST00000565379 MLXIPLQ9NP71 852 aa24.7■■□□□ 1.54
NME3-208ENST00000565379 MID1IP1Q9NPA3 183 aa24.7■■□□□ 1.54
NME3-208ENST00000565379 PSD3Q9NYI0 1048 aa24.7■■□□□ 1.54
NME3-208ENST00000565379 IL17BQ9UHF5 180 aa24.7■■□□□ 1.54
NME3-208ENST00000565379 DLGAP3O95886 979 aa24.69■■□□□ 1.54
NME3-208ENST00000565379 SERPINA6P08185 405 aa24.69■■□□□ 1.54
NME3-208ENST00000565379 TSPAN8P19075 237 aa24.69■■□□□ 1.54
NME3-208ENST00000565379 CPSF6Q16630 551 aaKnown RBP eCLIP24.69■■□□□ 1.54
NME3-208ENST00000565379 NDUFA9Q16795 377 aa24.69■■□□□ 1.54
NME3-208ENST00000565379 PWWP2BQ6NUJ5 590 aa24.69■■□□□ 1.54
NME3-208ENST00000565379 SYVN1Q86TM6 617 aa24.69■■□□□ 1.54
NME3-208ENST00000565379 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.69■■□□□ 1.54
NME3-208ENST00000565379 ANKRD53Q8N9V6 530 aa24.69■■□□□ 1.54
NME3-208ENST00000565379 OR7G3Q8NG95 312 aa24.69■■□□□ 1.54
NME3-208ENST00000565379 CDK15Q96Q40 435 aa24.69■■□□□ 1.54
NME3-208ENST00000565379 SLC7A5P2Q9GIP4 190 aa24.69■■□□□ 1.54
NME3-208ENST00000565379 PYCARD-AS1I3L0S3 204 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 PPP6CO00743 305 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 NDUFS4O43181 175 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 CPNE3O75131 537 aaKnown RBP24.68■■□□□ 1.54
NME3-208ENST00000565379 KRT6AP02538 564 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 KRT6BP04259 564 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 ITGB2P05107 769 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 KRT6CP48668 564 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 IFT88Q13099 833 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 ZRSR2Q15696 482 aaKnown RBP24.68■■□□□ 1.54
NME3-208ENST00000565379 MUM1Q2TAK8 710 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 ATG16L1Q676U5 607 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 TTC19Q6DKK2 380 aaPredicted RBP24.68■■□□□ 1.54
NME3-208ENST00000565379 NIPAL1Q6NVV3 410 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 LETMD1Q6P1Q0 360 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 NLGN4XQ8N0W4 816 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 NLGN4YQ8NFZ3 816 aaPredicted RBP24.68■■□□□ 1.54
NME3-208ENST00000565379 MOCOSQ96EN8 888 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 LRFN5Q96NI6 719 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 ACSS2Q9NR19 701 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 ZNF225Q9UK10 706 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 PPT2Q9UMR5 302 aa24.68■■□□□ 1.54
NME3-208ENST00000565379 TMEM184BQ9Y519 407 aaPredicted RBP24.68■■□□□ 1.54
NME3-208ENST00000565379 HYKKA2RU49 373 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 FOXE1O00358 373 aaPredicted RBP24.67■■□□□ 1.54
NME3-208ENST00000565379 NKX2-8O15522 239 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 ZNF749O43361 778 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 SLC28A2O43868 658 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 OR4F21O95013 312 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 PCNAP12004 261 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 STXBP1P61764 594 aaKnown RBP24.67■■□□□ 1.54
NME3-208ENST00000565379 ARL13AQ5H913 290 aaPredicted RBP24.67■■□□□ 1.54
NME3-208ENST00000565379 FRG2Q64ET8 278 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 RHBDD2Q6NTF9 364 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 ZCCHC23Q6ZST2 131 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 CUZD1Q86UP6 607 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 WDR20Q8TBZ3 569 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 METTL6Q8TCB7 284 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 PROKR1Q8TCW9 393 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 CREB3L4Q8TEY5 395 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 FRG2BQ96QU4 278 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 ULBP3Q9BZM4 244 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 ELOVL6Q9H5J4 265 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 ACTR5Q9H9F9 607 aaPredicted RBP24.67■■□□□ 1.54
NME3-208ENST00000565379 INTS9Q9NV88 658 aaKnown RBP24.67■■□□□ 1.54
NME3-208ENST00000565379 MYO18BQ8IUG5 2567 aa24.67■■□□□ 1.54
NME3-208ENST00000565379 UBFD1O14562 309 aaKnown RBP24.66■■□□□ 1.54
NME3-208ENST00000565379 KLF11O14901 512 aa24.66■■□□□ 1.54
NME3-208ENST00000565379 CRCPO75575 148 aa24.66■■□□□ 1.54
NME3-208ENST00000565379 TIAF1O95411 115 aa24.66■■□□□ 1.54
NME3-208ENST00000565379 CHN1P15882 459 aa24.66■■□□□ 1.54
NME3-208ENST00000565379 F8A1P23610 371 aa24.66■■□□□ 1.54
NME3-208ENST00000565379 HMOX2P30519 316 aa24.66■■□□□ 1.54
NME3-208ENST00000565379 GCGRP47871 477 aa24.66■■□□□ 1.54
NME3-208ENST00000565379 ABCE1P61221 599 aaKnown RBP24.66■■□□□ 1.54
NME3-208ENST00000565379 STX3Q13277 289 aa24.66■■□□□ 1.54
NME3-208ENST00000565379 FAM53BQ14153 422 aa24.66■■□□□ 1.54
NME3-208ENST00000565379 MAP7Q14244 749 aa24.66■■□□□ 1.54
NME3-208ENST00000565379 ZSCAN1Q8NBB4 408 aa24.66■■□□□ 1.54
NME3-208ENST00000565379 ZNF473Q8WTR7 871 aaKnown RBP24.66■■□□□ 1.54
NME3-208ENST00000565379 MVB12AQ96EY5 273 aa24.66■■□□□ 1.54
NME3-208ENST00000565379 CMTM7Q96FZ5 175 aa24.66■■□□□ 1.54
NME3-208ENST00000565379 DPH2Q9BQC3 489 aaPredicted RBP24.66■■□□□ 1.54
NME3-208ENST00000565379 ARHGAP9Q9BRR9 750 aa24.66■■□□□ 1.54
NME3-208ENST00000565379 SYNPO2LQ9H987 977 aa24.66■■□□□ 1.54
NME3-208ENST00000565379 CUTCQ9NTM9 273 aa24.66■■□□□ 1.54
NME3-208ENST00000565379 TXLNGQ9NUQ3 528 aa24.66■■□□□ 1.54
NME3-208ENST00000565379 RUVBL1Q9Y265 456 aaKnown RBP24.66■■□□□ 1.54
NME3-208ENST00000565379 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.66■■□□□ 1.54
NME3-208ENST00000565379 MRPS18BQ9Y676 258 aaKnown RBP24.66■■□□□ 1.54
NME3-208ENST00000565379 KIAA0754O94854 1291 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 SERPIND1P05546 499 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 CAPN1P07384 714 aa24.65■■□□□ 1.54
NME3-208ENST00000565379 FGF4P08620 206 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms