RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 RBMXL3Q8N7X1 1067 aaKnown RBP17.34■□□□□ 0.37
SYNGR3-204ENST00000564642 UTP15Q8TED0 518 aaKnown RBP17.34■□□□□ 0.37
SYNGR3-204ENST00000564642 SLC44A1Q8WWI5 657 aa17.34■□□□□ 0.37
SYNGR3-204ENST00000564642 CCT6BQ92526 530 aa17.34■□□□□ 0.37
SYNGR3-204ENST00000564642 PEX11GQ96HA9 241 aa17.34■□□□□ 0.37
SYNGR3-204ENST00000564642 CD244Q9BZW8 370 aa17.34■□□□□ 0.37
SYNGR3-204ENST00000564642 SLC6A16Q9GZN6 736 aa17.34■□□□□ 0.37
SYNGR3-204ENST00000564642 PITHD1Q9GZP4 211 aaPredicted RBP17.34■□□□□ 0.37
SYNGR3-204ENST00000564642 VN1R1Q9GZP7 353 aa17.34■□□□□ 0.37
SYNGR3-204ENST00000564642 CLMPQ9H6B4 373 aa17.34■□□□□ 0.37
SYNGR3-204ENST00000564642 NT5DC2Q9H857 520 aa17.34■□□□□ 0.37
SYNGR3-204ENST00000564642 RIC8BQ9NVN3 520 aa17.34■□□□□ 0.37
SYNGR3-204ENST00000564642 NFU1Q9UMS0 254 aa17.34■□□□□ 0.37
SYNGR3-204ENST00000564642 SCN2AQ99250 2005 aa17.33■□□□□ 0.37
SYNGR3-204ENST00000564642 A0A087WUV0 522 aaPredicted RBP17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 LOC102723996A0A087X1L8 192 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 IGHV1-45A0A0A0MS14 117 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 CCDC189A1A4V9 331 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 ANKDD1BA6NHY2 528 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 POC1B-GALNT4F8VUJ3 575 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 UBXN8O00124 270 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 RHOXF2BP0C7M4 288 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 GSTM2P28161 218 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 MSH2P43246 934 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 SERPINB9P50453 376 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 RAB8AP61006 207 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 STXBP1P61764 594 aaKnown RBP17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 IRF9Q00978 393 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 Q0VFX4 171 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 ACAP2Q15057 778 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 IGFBP7Q16270 282 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 XKR6Q5GH73 641 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 TOR1AIP1Q5JTV8 583 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 SLC6A19Q695T7 634 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 KLC3Q6P597 504 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 IGFL3Q6UXB1 125 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 LRRC70Q7Z2Q7 622 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 OR5T3Q8NGG3 340 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 RHEBL1Q8TAI7 183 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 UHMK1Q8TAS1 419 aaKnown RBP17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 CREB3L4Q8TEY5 395 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 PNPLA2Q96AD5 504 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 PTCD3Q96EY7 689 aaKnown RBP17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 OR1F2PQ96R84 312 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 ATOH8Q96SQ7 321 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 PAFAH2Q99487 392 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 RHOXF2Q9BQY4 288 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 VPS11Q9H270 941 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 EHD1Q9H4M9 534 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 LUZP4Q9P127 313 aa17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 C19orf25Q9UFG5 118 aaPredicted RBP17.33■□□□□ 0.36
SYNGR3-204ENST00000564642 A0A1W2PQ72 361 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 CHST10O43529 356 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 KLHL2O95198 593 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 B3GALT4O96024 378 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 ICAM2P13598 275 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 GLRBP48167 497 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 FOXK1P85037 733 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 IRF8Q02556 426 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 HYAL2Q12891 473 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 LAPTM5Q13571 262 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 HIST2H2ACQ16777 129 aaPredicted RBP17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 HIST2H2AA3Q6FI13 130 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 CPEB2Q7Z5Q1 589 aaKnown RBP17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 CENPLQ8N0S6 344 aaPredicted RBP17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 SHISA5Q8N114 240 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 EFCAB3Q8N7B9 438 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 SEC16BQ96JE7 1060 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 FAR2Q96K12 515 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 TUBB6Q9BUF5 446 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 ZNF700Q9H0M5 742 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 KLHL31Q9H511 634 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 EPS8L2Q9H6S3 715 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 CLK4Q9HAZ1 481 aaKnown RBP17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 ZBTB20Q9HC78 741 aaPredicted RBP17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 PRM3Q9NNZ6 103 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 OPTCQ9UBM4 332 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 B3GNT3Q9Y2A9 372 aa17.32■□□□□ 0.36
SYNGR3-204ENST00000564642 CDC123O75794 336 aaPredicted RBP17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 KRT38O76015 456 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 WFS1O76024 890 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 ALDOAP04075 364 aaKnown RBP17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 UQCRHP07919 91 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 PRR35P0CG20 571 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 JAK1P23458 1154 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 CNTFP26441 200 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 HPDP32754 393 aaPredicted RBP17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 AGTR2P50052 363 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 AP2B1P63010 937 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 OLR1P78380 273 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 CHIT1Q13231 466 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 DOC2AQ14183 400 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 PCOLCEQ15113 449 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 PLEKHN1Q494U1 663 aaPredicted RBP17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 PAGE2BQ5JRK9 111 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 ISLR2Q6UXK2 745 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 CPT1CQ8TCG5 803 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 TBC1D20Q96BZ9 403 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 EFCAB11Q9BUY7 163 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms