RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 OSGEPL1Q9H4B0 414 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 SUDS3Q9H7L9 328 aaPredicted RBP3.59□□□□□ -1.83
CHD9-212ENST00000564641 ZWILCHQ9H900 591 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 SDR39U1Q9NRG7 319 aaPredicted RBP3.59□□□□□ -1.83
CHD9-212ENST00000564641 PDRG1Q9NUG6 133 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 TMOD2Q9NZR1 351 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 ANAPC2Q9UJX6 822 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 TNNQ9UQP3 1299 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 EXOC6BQ9Y2D4 811 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 RIPK3Q9Y572 518 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 PCDHGA5Q9Y5G8 931 aa3.59□□□□□ -1.83
CHD9-212ENST00000564641 ASTN2O75129 1339 aaPredicted RBP3.59□□□□□ -1.83
CHD9-212ENST00000564641 KIAA0100Q14667 2235 aaKnown RBP3.58□□□□□ -1.84
CHD9-212ENST00000564641 TCRBV21S2A2A0A5A6 115 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 A8MU10 97 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 GOLGA6L19H0YKK7 550 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 GAPDHSO14556 408 aaPredicted RBP3.58□□□□□ -1.84
CHD9-212ENST00000564641 CTDSP2O14595 271 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 MITFO75030 526 aaPredicted RBP3.58□□□□□ -1.84
CHD9-212ENST00000564641 SKILP12757 684 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 STAT2P52630 851 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 PDX1P52945 283 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 MFAP4P55083 255 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 RWDD2BP57060 319 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 FKBP1AP62942 108 aaKnown RBP3.58□□□□□ -1.84
CHD9-212ENST00000564641 PNRC1Q12796 327 aaPredicted RBP3.58□□□□□ -1.84
CHD9-212ENST00000564641 KCNC3Q14003 757 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 CCDC57Q2TAC2 916 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 TTC19Q6DKK2 380 aaPredicted RBP3.58□□□□□ -1.84
CHD9-212ENST00000564641 KIAA0930Q6ICG6 404 aaPredicted RBP3.58□□□□□ -1.84
CHD9-212ENST00000564641 KRT80Q6KB66 452 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 IL27RAQ6UWB1 636 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 CWC27Q6UX04 472 aaKnown RBP3.58□□□□□ -1.84
CHD9-212ENST00000564641 LRRC31Q6UY01 552 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 INTS8Q75QN2 995 aaKnown RBP3.58□□□□□ -1.84
CHD9-212ENST00000564641 KIAA1328Q86T90 577 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 HOGA1Q86XE5 327 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 PLA2G4DQ86XP0 818 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 ITPRIPQ8IWB1 547 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 LRRC8AQ8IWT6 810 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 OR10G8Q8NGN5 311 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 RASL10AQ92737 203 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 SLCO2A1Q92959 643 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 GCNAQ96QF7 691 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 THUMPD2Q9BTF0 503 aaKnown RBP3.58□□□□□ -1.84
CHD9-212ENST00000564641 KIFC3Q9BVG8 833 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 APOL6Q9BWW8 343 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 ATP13A3Q9H7F0 1226 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 CHMP1AQ9HD42 196 aaPredicted RBP3.58□□□□□ -1.84
CHD9-212ENST00000564641 FGF21Q9NSA1 209 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 VPS18Q9P253 973 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 POLLQ9UGP5 575 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 ATP6V1DQ9Y5K8 247 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 RTL9Q8NET4 1388 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 PSME4Q14997 1843 aa3.58□□□□□ -1.84
CHD9-212ENST00000564641 A0A1B0GUA9 196 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 A0A1W2PR77 199 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 YDJCA8MPS7 323 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 PES1O00541 588 aaKnown RBP3.57□□□□□ -1.84
CHD9-212ENST00000564641 CHUKO15111 745 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 ERLIN1O75477 346 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 RSL1D1O76021 490 aaKnown RBP3.57□□□□□ -1.84
CHD9-212ENST00000564641 TPPPO94811 219 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 MYBL1P10243 752 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 HOXD10P28358 340 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 NKX2-1P43699 371 aaPredicted RBP3.57□□□□□ -1.84
CHD9-212ENST00000564641 CAPZA2P47755 286 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 LIG4P49917 911 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 PPP5CP53041 499 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 PRMT2P55345 433 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 EVCP57679 992 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 CYCSP99999 105 aaKnown RBP3.57□□□□□ -1.84
CHD9-212ENST00000564641 PEX6Q13608 980 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 IL16Q14005 1332 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 KRT33BQ14525 404 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 NR1D2Q14995 579 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 FASTKD3Q14CZ7 662 aaKnown RBP3.57□□□□□ -1.84
CHD9-212ENST00000564641 HSP90B2PQ58FF3 399 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 CAVIN4Q5BKX8 364 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 C11orf88Q6PI97 169 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 GALNTL5Q7Z4T8 443 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 KBTBD6Q86V97 674 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 CCAR2Q8N163 923 aaKnown RBP3.57□□□□□ -1.84
CHD9-212ENST00000564641 MOSPD2Q8NHP6 518 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 N4BP2L2Q92802 583 aaPredicted RBP3.57□□□□□ -1.84
CHD9-212ENST00000564641 ERLEC1Q96DZ1 483 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 CFAP57Q96MR6 1250 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 ABHD1Q96SE0 405 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 JPH2Q9BR39 696 aaPredicted RBP3.57□□□□□ -1.84
CHD9-212ENST00000564641 DGCR6LQ9BY27 220 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 SPHK1Q9NYA1 384 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 C5AR2Q9P296 337 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 EPHA6Q9UF33 1036 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 MAN1B1Q9UKM7 699 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.57□□□□□ -1.84
CHD9-212ENST00000564641 PPP1R3CQ9UQK1 317 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 GRIP1Q9Y3R0 1128 aa3.57□□□□□ -1.84
CHD9-212ENST00000564641 PCNX3Q9H6A9 2034 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 LTBP1Q14766 1721 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 hCG_1809904A0A1W2PP81 198 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms