RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 MAP2K7O14733 419 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 HNRNPRO43390 633 aaKnown RBP17.93■□□□□ 0.46
NME3-207ENST00000564628 KRT38O76015 456 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 EIF2S1P05198 315 aaKnown RBP17.93■□□□□ 0.46
NME3-207ENST00000564628 TYK2P29597 1187 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 BCL6P41182 706 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 CCR8P51685 355 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 ZNF169Q14929 603 aaPredicted RBP17.93■□□□□ 0.46
NME3-207ENST00000564628 ZRSR2Q15696 482 aaKnown RBP17.93■□□□□ 0.46
NME3-207ENST00000564628 NKG7Q16617 165 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 MUM1Q2TAK8 710 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 HKDC1Q2TB90 917 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 SULT1C3Q6IMI6 304 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 KIRREL2Q6UWL6 708 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 COX15Q7KZN9 410 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 CROCCP2Q86T23 111 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 DTWD1Q8N5C7 304 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 RHEBL1Q8TAI7 183 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 STAG3L4Q8TBR4 150 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 RERGQ96A58 199 aaPredicted RBP17.93■□□□□ 0.46
NME3-207ENST00000564628 TM4SF19Q96DZ7 209 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 VPS50Q96JG6 964 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 LHPPQ9H008 270 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 PELI2Q9HAT8 420 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 NUDT4Q9NZJ9 180 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 PTBP2Q9UKA9 531 aaKnown RBP17.93■□□□□ 0.46
NME3-207ENST00000564628 RNF112Q9ULX5 631 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 OSGIN2Q9Y236 505 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 HS3ST3B1Q9Y662 390 aa17.93■□□□□ 0.46
NME3-207ENST00000564628 NCF1BA6NI72 391 aaPredicted RBP17.92■□□□□ 0.46
NME3-207ENST00000564628 NCF1CA8MVU1 366 aaPredicted RBP17.92■□□□□ 0.46
NME3-207ENST00000564628 TXNDC9O14530 226 aa17.92■□□□□ 0.46
NME3-207ENST00000564628 KLHL2O95198 593 aa17.92■□□□□ 0.46
NME3-207ENST00000564628 MTHFD2P13995 350 aa17.92■□□□□ 0.46
NME3-207ENST00000564628 NCF1P14598 390 aaPredicted RBP17.92■□□□□ 0.46
NME3-207ENST00000564628 GDF5P43026 501 aa17.92■□□□□ 0.46
NME3-207ENST00000564628 SLC29A2Q14542 456 aa17.92■□□□□ 0.46
NME3-207ENST00000564628 TLR1Q15399 786 aa17.92■□□□□ 0.46
NME3-207ENST00000564628 FAM83EQ2M2I3 478 aa17.92■□□□□ 0.46
NME3-207ENST00000564628 CATSPEREQ5SY80 951 aa17.92■□□□□ 0.46
NME3-207ENST00000564628 GARNL3Q5VVW2 1013 aa17.92■□□□□ 0.46
NME3-207ENST00000564628 ADGRD1Q6QNK2 874 aa17.92■□□□□ 0.46
NME3-207ENST00000564628 MFSD9Q8NBP5 474 aa17.92■□□□□ 0.46
NME3-207ENST00000564628 SPNS1Q9H2V7 528 aa17.92■□□□□ 0.46
NME3-207ENST00000564628 EPS8L2Q9H6S3 715 aa17.92■□□□□ 0.46
NME3-207ENST00000564628 DYRK1BQ9Y463 629 aa17.92■□□□□ 0.46
NME3-207ENST00000564628 KCNE2Q9Y6J6 123 aa17.92■□□□□ 0.46
NME3-207ENST00000564628 CROCCQ5TZA2 2017 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 TRBC2A0A5B9 178 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 TRIM49D1C9J1S8 452 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 LCMT2O60294 686 aaKnown RBP17.91■□□□□ 0.46
NME3-207ENST00000564628 WDR47O94967 919 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 REEP5Q00765 189 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 CDC16Q13042 620 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 ACAP2Q15057 778 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 TUBB8Q3ZCM7 444 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 PRMT9Q6P2P2 845 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 NXPE4Q6UWF7 544 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 LRIG3Q6UXM1 1119 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 PLD6Q8N2A8 252 aaKnown RBP17.91■□□□□ 0.46
NME3-207ENST00000564628 UBTD2Q8WUN7 234 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.91■□□□□ 0.46
NME3-207ENST00000564628 MARVELD3Q96A59 401 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 MVB12AQ96EY5 273 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 CABS1Q96KC9 395 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 TSNARE1Q96NA8 513 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 SLX1AQ9BQ83 275 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 CNOT10Q9H9A5 744 aaKnown RBP17.91■□□□□ 0.46
NME3-207ENST00000564628 SEMA3GQ9NS98 782 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 ZNF446Q9NWS9 450 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 WWOXQ9NZC7 414 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 CD274Q9NZQ7 290 aa17.91■□□□□ 0.46
NME3-207ENST00000564628 DOCK10Q96BY6 2186 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 A0A1B0GUH1 482 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 FEZF1A0PJY2 475 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 ALOX12BO75342 701 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 STSP08842 583 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 SNRPAP09012 282 aaKnown RBP17.9■□□□□ 0.46
NME3-207ENST00000564628 NUDT17P0C025 328 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 ELAVL4P26378 380 aaKnown RBP17.9■□□□□ 0.46
NME3-207ENST00000564628 GRK3P35626 688 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 SCTRP47872 440 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 MEF2AQ02078 507 aaPredicted RBP17.9■□□□□ 0.46
NME3-207ENST00000564628 IFFO1Q0D2I5 559 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 RPUSD3Q6P087 351 aaKnown RBP17.9■□□□□ 0.46
NME3-207ENST00000564628 TIFABQ6ZNK6 161 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 SLCO4C1Q6ZQN7 724 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 SRRM1Q8IYB3 904 aaKnown RBP17.9■□□□□ 0.46
NME3-207ENST00000564628 ZNF740Q8NDX6 193 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 CNDP1Q96KN2 507 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 LMF1Q96S06 567 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 VPS11Q9H270 941 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 DNAJC11Q9NVH1 559 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 GPRC5BQ9NZH0 403 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 ASB1Q9Y576 335 aa17.9■□□□□ 0.46
NME3-207ENST00000564628 TEP1Q99973 2627 aaKnown RBP17.9■□□□□ 0.46
NME3-207ENST00000564628 SCN3AQ9NY46 2000 aa17.89■□□□□ 0.46
NME3-207ENST00000564628 VSTM2BA6NLU5 285 aa17.89■□□□□ 0.45
NME3-207ENST00000564628 SYCE1LA8MT33 242 aa17.89■□□□□ 0.45
NME3-207ENST00000564628 UBXN8O00124 270 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms