RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 FCGR1BQ92637 280 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 SCRN2Q96FV2 425 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 CMTM7Q96FZ5 175 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 APIPQ96GX9 242 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 LINC00597Q9H2U6 94 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 TM9SF3Q9HD45 589 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 KLHL28Q9NXS3 571 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 TRPS1Q9UHF7 1281 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 ENTPD4Q9Y227 616 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 ASB1Q9Y576 335 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 MYO10Q9HD67 2058 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 A0A1W2PRB8 838 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 HAT1O14929 419 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 HOXC11O43248 304 aaPredicted RBP10.09□□□□□ -0.79
RNF40-204ENST00000563683 ZW10O43264 779 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 MMP20O60882 483 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 PRR35P0CG20 571 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 SRCP12931 536 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 HK3P52790 923 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 ZXDBP98169 803 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 SMUG1Q53HV7 270 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 TPRG1LQ5T0D9 272 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 ARMC4Q5T2S8 1044 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 LAIR2Q6ISS4 152 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 CLECL1Q8IZS7 167 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 SIMC1Q8NDZ2 872 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 IRF7Q92985 503 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 MED30Q96HR3 178 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 SLC35A5Q9BS91 424 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 ENOPH1Q9UHY7 261 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 MKLN1Q9UL63 735 aa10.09□□□□□ -0.79
RNF40-204ENST00000563683 EIF3FO00303 357 aaPredicted RBP10.08□□□□□ -0.8
RNF40-204ENST00000563683 ADAMDEC1O15204 470 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 OR1F1O43749 312 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 POP7O75817 140 aaKnown RBP10.08□□□□□ -0.8
RNF40-204ENST00000563683 FGBP02675 491 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 ACVR2AP27037 513 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 CTGFP29279 349 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 DNAJA1P31689 397 aaKnown RBP10.08□□□□□ -0.8
RNF40-204ENST00000563683 VIPR1P32241 457 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 SLC35A2P78381 396 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 PRKCDQ05655 676 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 FAM180BQ6P0A1 224 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 SUN5Q8TC36 379 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 LKAAEAR1Q8TD35 194 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 NETO1Q8TDF5 533 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 FBLIM1Q8WUP2 373 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 WBP2Q969T9 261 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 ISG20Q96AZ6 181 aaKnown RBP10.08□□□□□ -0.8
RNF40-204ENST00000563683 RAD51AP1Q96B01 352 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 ZSCAN5AQ9BUG6 496 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 KCNH6Q9H252 994 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 IL37Q9NZH6 218 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 IL36AQ9UHA7 158 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 PLAGL1Q9UM63 463 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 ARNTLO00327 626 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 TGM5O43548 720 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 MITFO75030 526 aaPredicted RBP10.08□□□□□ -0.8
RNF40-204ENST00000563683 PEX11BO96011 259 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 IFNW1P05000 195 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 CCL5P13501 91 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 NTSP30990 170 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 OR2B6P58173 313 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 DOC2AQ14183 400 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 AAK1Q2M2I8 961 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 DGKKQ5KSL6 1271 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 FAM124AQ86V42 546 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 KBTBD8Q8NFY9 601 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 DNAJB8Q8NHS0 232 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 WFDC5Q8TCV5 224 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 LINC01599Q8WXQ3 324 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 SLC38A4Q969I6 547 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 AIF1LQ9BQI0 150 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 HCFC1R1Q9NWW0 138 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 THUMPD1Q9NXG2 353 aaKnown RBP10.08□□□□□ -0.8
RNF40-204ENST00000563683 TOR4AQ9NXH8 423 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 EHD3Q9NZN3 535 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 TEKT2Q9UIF3 430 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 ERVW-1Q9UQF0 538 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 PCDHGB3Q9Y5G1 929 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 N6AMT1Q9Y5N5 214 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 PEX16Q9Y5Y5 336 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 MGAMO43451 1857 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 PARP14Q460N5 1801 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 PITPNM1O00562 1244 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 AIREO43918 545 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 PRLP01236 227 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 DCTP40126 519 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 SPINT3P49223 89 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 TAS2R50P59544 299 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 ELP6Q0PNE2 266 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 IFI44LQ53G44 452 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 IER5LQ5T953 404 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 UBE2UQ5VVX9 321 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 GET4Q7L5D6 327 aaPredicted RBP10.08□□□□□ -0.8
RNF40-204ENST00000563683 GPR65Q8IYL9 337 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 METTL4Q8N3J2 472 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 PKP4Q99569 1192 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 CCM2Q9BSQ5 444 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 ITPAQ9BY32 194 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms