RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 PRKNO60260 465 aaPredicted RBP7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 KIF5CO60282 957 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 ITGA10O75578 1167 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 CNOT4O95628 575 aaKnown RBP7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 GOT2P00505 430 aaKnown RBP7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 GABRA1P14867 456 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 BMP7P18075 431 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 IL10P22301 178 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 CYLC1P35663 651 aaPredicted RBP7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 CCNFP41002 786 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 ZNF136P52737 540 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 WNT3P56703 355 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 PLGLB1Q02325 96 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 ACVR1Q04771 509 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 FOXO1Q12778 655 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 NFKBIBQ15653 356 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 CATSPEREQ5SY80 951 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 WLSQ5T9L3 541 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 NDUFAF5Q5TEU4 345 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 BRICD5Q6PL45 260 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 SLC22A16Q86VW1 577 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 LRRC56Q8IYG6 542 aaPredicted RBP7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 RAB42Q8N4Z0 105 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 KCT2Q8NC54 265 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 TNIP2Q8NFZ5 429 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 OR9A1PQ8NGU1 263 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 SLC35G2Q8TBE7 412 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 CTNNBL1Q8WYA6 563 aaPredicted RBP7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 SMPDL3AQ92484 453 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 SMPDL3BQ92485 455 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 DEFB126Q9BYW3 111 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 P2RY12Q9H244 342 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 TIMMDC1Q9NPL8 285 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 PIH1D1Q9NWS0 290 aaKnown RBP7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 JKAMPQ9P055 326 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 ADGRE2Q9UHX3 823 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 PCDHGB3Q9Y5G1 929 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 NPFFR2Q9Y5X5 522 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 MRFAP1Q9Y605 127 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 DUSP10Q9Y6W6 482 aa7.16□□□□□ -1.26
HERPUD1-206ENST00000563343 EXPH5Q8NEV8 1989 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 IGKV3D-11A0A0A0MRZ8 115 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 TCRBV16S1A1N1A0A5B0 115 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 ZNF860A6NHJ4 632 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 F8W8V4 182 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 APOC4-APOC2K7ER74 178 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 DVL2O14641 736 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 PHF1O43189 567 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 SIAH2O43255 324 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 SOX30O94993 753 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 APOC2P02655 101 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 TMEM253P0C7T8 217 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 RPA3P35244 121 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 MAN2A2P49641 1150 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 GPR143P51810 404 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 BTG2P78543 158 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 ABATP80404 500 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 PRPSAP1Q14558 356 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 NR1I3Q14994 352 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 ARHGAP19Q14CB8 494 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 TMED2Q15363 201 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 ASTE1Q2TB18 679 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 KRTAP24-1Q3LI83 254 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 FILIP1LQ4L180 1135 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 CCDC38Q502W7 563 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 XKR6Q5GH73 641 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 HEPHL1Q6MZM0 1159 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 AFTPHQ6ULP2 937 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 QSOX2Q6ZRP7 698 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 LDB1Q86U70 411 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 KIF18BQ86Y91 864 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 HIPK1Q86Z02 1210 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 ULK2Q8IYT8 1036 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 AFAP1L2Q8N4X5 818 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 TMEM156Q8N614 296 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 PPFIBP2Q8ND30 876 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 ZCCHC10Q8TBK6 192 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 MCOLN3Q8TDD5 553 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 IGFBPL1Q8WX77 278 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 PIGTQ969N2 578 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 SARAFQ96BY9 339 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 ZNF778Q96MU6 729 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 TSSK1BQ9BXA7 367 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 IL1RL2Q9HB29 575 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 ZNF629Q9UEG4 869 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 MTRF1LQ9UGC7 380 aaKnown RBP7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 SLC2A6Q9UGQ3 507 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 ACAD8Q9UKU7 415 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 PPIEQ9UNP9 301 aaKnown RBP7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 NAALAD2Q9Y3Q0 740 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 PCDHA3Q9Y5H8 950 aa7.15□□□□□ -1.26
HERPUD1-206ENST00000563343 TRBV11-1A0A0K0K1C0 115 aa7.14□□□□□ -1.27
HERPUD1-206ENST00000563343 E7ENX8 843 aa7.14□□□□□ -1.27
HERPUD1-206ENST00000563343 G3V3Y1 287 aa7.14□□□□□ -1.27
HERPUD1-206ENST00000563343 H7BY64 318 aa7.14□□□□□ -1.27
HERPUD1-206ENST00000563343 H7C0C1 242 aa7.14□□□□□ -1.27
HERPUD1-206ENST00000563343 PRMT5O14744 637 aaPredicted RBP7.14□□□□□ -1.27
HERPUD1-206ENST00000563343 LCMT2O60294 686 aaKnown RBP7.14□□□□□ -1.27
HERPUD1-206ENST00000563343 HCN1O60741 890 aa7.14□□□□□ -1.27
HERPUD1-206ENST00000563343 PSIP1O75475 530 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms