RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 KLHDC8BQ8IXV7 354 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 AMER3Q8N944 861 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 ANKRD20A12PQ8NF67 263 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 OR52N5Q8NH56 324 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 OR4A16Q8NH70 328 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 EXOC6Q8TAG9 804 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 SAP25Q8TEE9 199 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 TAF4BQ92750 862 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 LGALS12Q96DT0 336 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 TSSK2Q96PF2 358 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 RASL10BQ96S79 203 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 C17orf62Q9BQA9 187 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 PANK2Q9BZ23 570 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 OR2B2Q9GZK3 357 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 DDX47Q9H0S4 455 aaKnown RBP2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 ACTL8Q9H568 366 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 MRPL17Q9NRX2 175 aaKnown RBP2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 FAM212BQ9NTI7 297 aaPredicted RBP2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 HPF1Q9NWY4 346 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 PSORS1C1Q9UIG5 152 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 TRMT6Q9UJA5 497 aaKnown RBP2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 KCNJ14Q9UNX9 436 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 AGTPBP1Q9UPW5 1226 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 GAB2Q9UQC2 676 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 PIN4Q9Y237 131 aaKnown RBP2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 ZNF510Q9Y2H8 683 aa2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 SPAG9O60271 1321 aaKnown RBP2.9□□□□□ -1.95
SHCBP1-202ENST00000563219 ARID2Q68CP9 1835 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 C2orf92A0A1B0GVN3 265 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 RGSL1A5PLK6 1076 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 O00370 1275 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 B4GAT1O43505 415 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 KIF5CO60282 957 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 LETM1O95202 739 aaPredicted RBP2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 CXCL14O95715 111 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 EML2O95834 649 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 GUCA1CO95843 209 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 MT-ATP6P00846 226 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 NGFP01138 241 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 APOHP02749 345 aaPredicted RBP2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 ATP1B1P05026 303 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 EDN1P05305 212 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 CD48P09326 243 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 CFC1BP0CG36 223 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 CFC1P0CG37 223 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 CETN2P41208 172 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 IER3P46695 156 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 DNA2P51530 1060 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 ATXN3P54252 364 aaPredicted RBP2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 MAZP56270 477 aaKnown RBP2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 GMFBP60983 142 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 HERV-K104P61576 105 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 BTG1P62324 171 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 GNB1P62873 340 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 CETN1Q12798 172 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 PPP1R8Q12972 351 aaKnown RBP2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 ZNF876PQ49A33 203 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 SLC35D3Q5M8T2 416 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 ARHGEF16Q5VV41 709 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 PRAMEF7Q5VXH5 474 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 MACC1Q6ZN28 852 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 C17orf107Q6ZR85 190 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 SH2D5Q6ZV89 423 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 MIER3Q7Z3K6 550 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 NLRP14Q86W24 1093 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 ZC3H3Q8IXZ2 948 aaKnown RBP2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 BATF2Q8N1L9 274 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 MARVELD2Q8N4S9 558 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 TMEM185AQ8NFB2 350 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 OR13C3Q8NGS6 347 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 OR4C3Q8NH37 302 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 GGHQ92820 318 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 FBXO17Q96EF6 278 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 GIMAP5Q96F15 307 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 FAM111AQ96PZ2 611 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 MAP3K3Q99759 626 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 NTMT1Q9BV86 223 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 TEX13AQ9BXU3 409 aaPredicted RBP2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 NAPBQ9H115 298 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 SDCBP2Q9H190 292 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 CARD9Q9H257 536 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 CPVLQ9H3G5 476 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 RWDD1Q9H446 243 aaPredicted RBP2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 ZNF696Q9H7X3 374 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 RPF1Q9H9Y2 349 aaKnown RBP2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 RAVER2Q9HCJ3 691 aaKnown RBP2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 CHST11Q9NPF2 352 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 ZNF71Q9NQZ8 489 aaPredicted RBP2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 PNPLA3Q9NST1 481 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 COMMD8Q9NX08 183 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 OR6C2Q9NZP2 312 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 HMG20BQ9P0W2 317 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 ACTR3BQ9P1U1 418 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 MAD2L2Q9UI95 211 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 ATP8B3O60423 1300 aa2.89□□□□□ -1.95
SHCBP1-202ENST00000563219 MACROD2A1Z1Q3 448 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 ANTXRLA6NF34 631 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 CHUKO15111 745 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 MLNRO43193 412 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms