RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 FAM218AQ96MZ4 157 aa2.41□□□□□ -2.02
CHD9-207ENST00000562806 SOSTQ9BQB4 213 aa2.41□□□□□ -2.02
CHD9-207ENST00000562806 PAPOLGQ9BWT3 736 aaKnown RBP2.41□□□□□ -2.02
CHD9-207ENST00000562806 RBM24Q9BX46 236 aaKnown RBP2.41□□□□□ -2.02
CHD9-207ENST00000562806 DNAI2Q9GZS0 605 aa2.41□□□□□ -2.02
CHD9-207ENST00000562806 ANKRD2Q9GZV1 360 aa2.41□□□□□ -2.02
CHD9-207ENST00000562806 HEXA-AS1Q9H8Q6 139 aa2.41□□□□□ -2.02
CHD9-207ENST00000562806 BAIAP2L1Q9UHR4 511 aa2.41□□□□□ -2.02
CHD9-207ENST00000562806 MYH14Q7Z406 1995 aaKnown RBP2.41□□□□□ -2.02
CHD9-207ENST00000562806 BCLAF3A2AJT9 711 aaKnown RBP2.4□□□□□ -2.03
CHD9-207ENST00000562806 TRIM49BA6NDI0 452 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 C5orf52A6NGY3 159 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 OGTO15294 1046 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 PPIP5K2O43314 1243 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 FCGR3BO75015 233 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 RPLP0P05388 317 aaKnown RBP2.4□□□□□ -2.03
CHD9-207ENST00000562806 HSP90AB1P08238 724 aaKnown RBP2.4□□□□□ -2.03
CHD9-207ENST00000562806 PCP11498 1178 aaKnown RBP2.4□□□□□ -2.03
CHD9-207ENST00000562806 CASTP20810 708 aaKnown RBP2.4□□□□□ -2.03
CHD9-207ENST00000562806 SSTR1P30872 391 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 HOXC13P31276 330 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 FEN1P39748 380 aaKnown RBP2.4□□□□□ -2.03
CHD9-207ENST00000562806 ZFP36L2P47974 494 aaKnown RBP2.4□□□□□ -2.03
CHD9-207ENST00000562806 GMPSP49915 693 aaPredicted RBP2.4□□□□□ -2.03
CHD9-207ENST00000562806 NPY4RP50391 375 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 RIDAP52758 137 aaKnown RBP2.4□□□□□ -2.03
CHD9-207ENST00000562806 CRYBA2P53672 197 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 SRPXP78539 464 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 FKBP3Q00688 224 aaKnown RBP2.4□□□□□ -2.03
CHD9-207ENST00000562806 TAZQ16635 292 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 ALDH1L2Q3SY69 923 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 KRT71Q3SY84 523 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 OLFML2AQ68BL7 652 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.4□□□□□ -2.03
CHD9-207ENST00000562806 DHRS11Q6UWP2 260 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 TMUB2Q71RG4 321 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 SPATA19Q7Z5L4 167 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 MEX3DQ86XN8 651 aaKnown RBP2.4□□□□□ -2.03
CHD9-207ENST00000562806 LMNTD2Q8IXW0 634 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 TEX26Q8N6G2 289 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 OR9Q2Q8NGE9 314 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 OCC1Q8TAD7 63 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 HEXDCQ8WVB3 486 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.4□□□□□ -2.03
CHD9-207ENST00000562806 RBM41Q96IZ5 413 aaKnown RBP2.4□□□□□ -2.03
CHD9-207ENST00000562806 SPATA17Q96L03 361 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 PCDHB18PQ96TA0 734 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 HNRNPABQ99729 332 aaKnown RBP2.4□□□□□ -2.03
CHD9-207ENST00000562806 ALKBH7Q9BT30 221 aaPredicted RBP2.4□□□□□ -2.03
CHD9-207ENST00000562806 ST6GALNAC4Q9H4F1 302 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 SP140LQ9H930 580 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 VIPAS39Q9H9C1 493 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 VPS18Q9P253 973 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 TSPAN16Q9UKR8 245 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 SATB2Q9UPW6 733 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 MRPS18CQ9Y3D5 142 aaKnown RBP2.4□□□□□ -2.03
CHD9-207ENST00000562806 ARID2Q68CP9 1835 aa2.4□□□□□ -2.03
CHD9-207ENST00000562806 PCNX3Q9H6A9 2034 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 IGHV3-20A0A0C4DH32 117 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 IGHV3-38A0A0C4DH36 116 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 A0A1B0GVY2 172 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 ILVBLA1L0T0 632 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 ACOD1A6NK06 481 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 CCL24O00175 119 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 TLX2O43763 284 aaPredicted RBP2.39□□□□□ -2.03
CHD9-207ENST00000562806 KIF5CO60282 957 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 SNAP91O60641 907 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 PRAF2O60831 178 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 RAD51DO75771 328 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 GRAP2O75791 330 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 TCF4P15884 667 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 IFNAR1P17181 557 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 ITIH1P19827 911 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 TIA1P31483 386 aaKnown RBP eCLIP2.39□□□□□ -2.03
CHD9-207ENST00000562806 FCGR2BP31994 310 aaPredicted RBP2.39□□□□□ -2.03
CHD9-207ENST00000562806 FCGR2CP31995 323 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 SLC1A3P43003 542 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 IER3P46695 156 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 NPBWR1P48145 328 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 RPL34P49207 117 aaKnown RBP2.39□□□□□ -2.03
CHD9-207ENST00000562806 RPP38P78345 283 aaKnown RBP2.39□□□□□ -2.03
CHD9-207ENST00000562806 ZNF146Q15072 292 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 ZNF239Q16600 458 aaKnown RBP2.39□□□□□ -2.03
CHD9-207ENST00000562806 FAM133BQ5BKY9 247 aaKnown RBP2.39□□□□□ -2.03
CHD9-207ENST00000562806 ARMCX4Q5H9R4 360 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 TCTEX1D4Q5JR98 221 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 SLC25A30Q5SVS4 291 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.39□□□□□ -2.03
CHD9-207ENST00000562806 OR4C11Q6IEV9 310 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 CASC4Q6P4E1 433 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 RFPL4BQ6ZWI9 263 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 TRMT11Q7Z4G4 463 aaKnown RBP2.39□□□□□ -2.03
CHD9-207ENST00000562806 ANKRD46Q86W74 232 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 FAM219AQ8IW50 185 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 SPAG16Q8N0X2 631 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 ZNF444Q8N0Y2 327 aaPredicted RBP2.39□□□□□ -2.03
CHD9-207ENST00000562806 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.39□□□□□ -2.03
CHD9-207ENST00000562806 AFAP1L1Q8TED9 768 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 CHPT1Q8WUD6 406 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 DEPDC1BQ8WUY9 529 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms