RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 ERCC6LQ2NKX8 1250 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 MYLK4Q86YV6 388 aaPredicted RBP18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 AFAP1L2Q8N4X5 818 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 CLEC1AQ8NC01 280 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 OR5T3Q8NGG3 340 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 EPS8L3Q8TE67 593 aaKnown RBP18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 UTP15Q8TED0 518 aaKnown RBP18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 MRPL57Q9BQC6 102 aaKnown RBP18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 TGIF2Q9GZN2 237 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 PITHD1Q9GZP4 211 aaPredicted RBP18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 COPG2Q9UBF2 871 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 MKL2Q9ULH7 1088 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 TP53TG5Q9Y2B4 290 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 TNPO3Q9Y5L0 923 aaKnown RBP18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 FOXO6A8MYZ6 492 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 C4orf51C9J302 202 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 AGPSO00116 658 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 GALR3O60755 368 aaPredicted RBP18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 BMP10O95393 424 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 IGHEP01854 428 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 HEXBP07686 556 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 SERPINA6P08185 405 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 EEF1DP29692 281 aaKnown RBP18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 XCR1P46094 333 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 EMP2P54851 167 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 LAPTM5Q13571 262 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 RAPSNQ13702 412 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 PCBP2Q15366 365 aaKnown RBP eCLIP18.85■□□□□ 0.617e-7■■■■■ 27.7
TSPAN3-210ENST00000561277 TBCCQ15814 346 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 HIST2H2ACQ16777 129 aaPredicted RBP18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 MINDY4Q4G0A6 757 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 DCAF10Q5QP82 559 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 HIST2H2AA3Q6FI13 130 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 FAAH2Q6GMR7 532 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 WDR93Q6P2C0 686 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 KIRREL2Q6UWL6 708 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 MZB1Q8WU39 189 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 C8orf44Q96CB5 159 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 AICDAQ9GZX7 198 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 NT5DC2Q9H857 520 aa18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 ZNF490Q9ULM2 529 aaPredicted RBP18.85■□□□□ 0.61
TSPAN3-210ENST00000561277 MED13Q9UHV7 2174 aa18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 E2F3O00716 465 aa18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 WFS1O76024 890 aa18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 PYGBP11216 843 aa18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 GSTM2P28161 218 aa18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 HNRNPH1P31943 449 aaKnown RBP18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 STXBP1P61764 594 aaKnown RBP18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 SKP1P63208 163 aa18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 GTF2H2Q13888 395 aa18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 LACTB2Q53H82 288 aaPredicted RBP18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 GTF2H2CQ6P1K8 395 aa18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 GOLGA7Q7Z5G4 137 aa18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 VN1R5Q7Z5H4 357 aa18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 OR2W6PQ8NHA6 318 aa18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 NACC2Q96BF6 587 aa18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 PEX11GQ96HA9 241 aa18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 SLC25A23Q9BV35 468 aa18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 TMEM216Q9P0N5 145 aa18.84■□□□□ 0.61
TSPAN3-210ENST00000561277 TLN1Q9Y490 2541 aaKnown RBP18.83■□□□□ 0.61
TSPAN3-210ENST00000561277 A0A0G2JN53 185 aa18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 A0A1W2PPM1 405 aa18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 K7EM74 188 aa18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 CDC123O75794 336 aaPredicted RBP18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 PCNAP12004 261 aa18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 KRT15P19012 456 aa18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 ARL1P40616 181 aaPredicted RBP18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 CASP2P42575 452 aa18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 C19orf57Q0VDD7 668 aa18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 TUBB8Q3ZCM7 444 aa18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 MED27Q6P2C8 311 aa18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 PTRH1Q86Y79 214 aaKnown RBP18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 FDCSPQ8NFU4 85 aa18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 OR11G2Q8NGC1 345 aa18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 ACMSDQ8TDX5 336 aa18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 AENQ8WTP8 325 aaKnown RBP18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 ACTR8Q9H981 624 aa18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 TMCO1Q9UM00 188 aa18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 CFAP46Q8IYW2 2715 aa18.83■□□□□ 0.6
TSPAN3-210ENST00000561277 ERI3O43414 337 aaKnown RBP18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 DNAJB6O75190 326 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 CLEC3AO75596 197 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 SBK3P0C264 359 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 ACPPP15309 386 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 PIK3CGP48736 1102 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 EFNA3P52797 238 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 BTN3A2P78410 334 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 E2F2Q14209 437 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 GRHL2Q6ISB3 625 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 NIPAL1Q6NVV3 410 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 EMBQ6PCB8 327 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 UBE2E3Q969T4 207 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 GAL3ST3Q96A11 431 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 SEC16BQ96JE7 1060 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 VN1R1Q9GZP7 353 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 REXO4Q9GZR2 422 aaKnown RBP18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 RHBGQ9H310 441 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 IPPKQ9H8X2 491 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 PPCSQ9HAB8 311 aa18.82■□□□□ 0.6
TSPAN3-210ENST00000561277 NUP210LQ5VU65 1888 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms